Evidence map›Paper›PMID 31331946›Full record

ArticleGenetics2019

Using a Robust and Sensitive GFP-Based cGMP Sensor for Real-Time Imaging in Intact

Sarah Woldemariam, Jatin Nagpal, Tyler Hill, Joy Li, Martin W Schneider, Raakhee Shankar, Mary Futey, Aruna Varshney, Nebat Ali, Jordan Mitchell and 13 more

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
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  4. Invade or die: behaviours and biochemical mechanisms that drive skin penetration inPhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Review
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  14. microPublication biology · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 6 institutions in 2 countries.

Sarah WoldemariamChemistry and Chemical Biology Graduate Program, University of California, San Francisco, California 94158.ORCID 0000-0003-1873-8575
Jatin NagpalDepartment of Molecular Membrane Biology and Neurobiology, The Goethe University, 60323 Frankfurt, Germany.
Tyler HillNeuroscience Graduate Program, Brandeis University, Waltham, Massachusetts 02453.
Joy LiDepartment of Biological Sciences, San Jose State University, California 95192.
Martin W SchneiderDepartment of Molecular Membrane Biology and Neurobiology, The Goethe University, 60323 Frankfurt, Germany.
Raakhee ShankarDepartment of Biological Sciences, San Jose State University, California 95192.
Mary FuteyDepartment of Cell and Tissue Biology, University of California, San Francisco, California 94143.
Aruna VarshneyDepartment of Biological Sciences, San Jose State University, California 95192.
Nebat AliDepartment of Biological Sciences, San Jose State University, California 95192.
Jordan MitchellDepartment of Biological Sciences, San Jose State University, California 95192.
Kristine AndersenDepartment of Biological Sciences, San Jose State University, California 95192.
Benjamin Barsi-RhyneDepartment of Biological Sciences, San Jose State University, California 95192.
Alan TranDepartment of Biological Sciences, San Jose State University, California 95192.
Wagner Steuer CostaDepartment of Molecular Membrane Biology and Neurobiology, The Goethe University, 60323 Frankfurt, Germany.
Michelle C KrzyzanowskiDepartment of Biological Sciences, University at Buffalo, The State University of New York, New York 14260.
Yanxun V YuDepartment of Biology, Brandeis University, Waltham, Massachusetts 02454.
Chantal BrueggemannDepartment of Cell and Tissue Biology, University of California, San Francisco, California 94143.
O Scott HamiltonCenter for Neuroscience, University of California, Davis, California 95618.ORCID 0000-0001-7302-3439
Denise M FerkeyDepartment of Biological Sciences, University at Buffalo, The State University of New York, New York 14260.
Miri VanHovenDepartment of Biological Sciences, San Jose State University, California 95192.
Piali SenguptaDepartment of Biology, Brandeis University, Waltham, Massachusetts 02454.
Alexander GottschalkDepartment of Molecular Membrane Biology and Neurobiology, The Goethe University, 60323 Frankfurt, Germany.ORCID 0000-0002-1197-6119
Noelle L'EtoileDepartment of Cell and Tissue Biology, University of California, San Francisco, California 94143 noelle.letoile@ucsf.edu.ORCID 0000-0001-7885-9286
San Jose State University · USUniversity of California, San Francisco · USBrandeis University · USGoethe University Frankfurt · DEUniversity at Buffalo, State University of New York · USUniversity of California, Davis · US

Funding

UCSF INTEGRATED DDS-PHD TRAINING PROGRAMT32DE007306 · NIDCR · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Yukiko Nakano · 1996 to 2026
$15.4M
RESEARCH TRAINING IN CHEMISTRY AND CHEMICAL BIOLOGYT32GM064337 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CRAIK, CHARLES SCOTT · 2002 to 2021
$7.8M
Mechanisms of sensory neuron morphological diversification, signaling, and functional plasticityR35GM122463 · NIGMS · BRANDEIS UNIVERSITY · PI Piali Sengupta · 2017 to 2026
$7.7M
GENETIC AND BIOCHEMICAL MECHANISMS OF REGULATIONT32GM007122 · NIGMS · BRANDEIS UNIVERSITY · PI LOVETT, SUSAN THOMAS · 1985 to 2020
$7.5M
Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
Olfactory memory acquisition consolidation and recallR01DC005991 · NIDCD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI L 'ETOILE, NOELLE D · 2005 to 2022
$7.1M
The Effects of Stimulation and Sleep on Neural Circuit ConnectionsR01NS087544 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Noelle D L 'Etoile, Miri Kerensa VanHoven · 2014 to 2026
$6.2M
Gap Junction-Mediated Regulation of Nociceptive Sensory SignalingR01DC015758 · NIDCD · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI FERKEY, DENISE MARIE · 2017 to 2021
$1.7M
Undergraduate and Graduate Training in Computational NeuroscienceT90DA032435 · NIDA · BRANDEIS UNIVERSITY · PI MILLER, PAUL · 2011 to 2020
$1.6M
Spinning disk confocal / FRAP microscope for quantitative live cell imagingS10RR026758 · NCRR · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI WITTMANN, TORSTEN · 2010 to 2010
$500k
NCRR NIH HHS S10 RR026758NIDA NIH HHS T90 DA032435NIDCD NIH HHS R01 DC005991NIDCD NIH HHS R01 DC015758NIDCR NIH HHS T32 DE007306NIGMS NIH HHS R35 GM122463NIGMS NIH HHS T32 GM007122NIGMS NIH HHS T32 GM064337NIH HHS P40 OD010440NINDS NIH HHS R01 NS087544
6 · The paper itself

Abstract

cGMP plays a role in sensory signaling and plasticity by regulating ion channels, phosphodiesterases, and kinases. Studies that primarily used genetic and biochemical tools suggest that cGMP is spatiotemporally regulated in multiple sensory modalities. FRET- and GFP-based cGMP sensors were developed to visualize cGMP in primary cell culture and

Indexed as

AnimalsCaenorhabditis elegansCells, CulturedCyclic GMPFluorescence Resonance Energy TransferGreen Fluorescent ProteinsGuanylate CyclaseOpsinsOptical ImagingOptogeneticsSensory Receptor CellsCyclic GMPGreen Fluorescent ProteinsGuanylate CyclaseOpsinsC. eleganscGMPFlincG3sensory neuronvisual reporter

Identifiers

PMID31331946
PMCPMC6727795
OpenAlexW2962791731

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.