Evidence map›Paper›PMID 31329593›Full record

ArticlePLoS genetics2019

Recurrent gene co-amplification on Drosophila X and Y chromosomes.

Christopher Ellison, Doris Bachtrog

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
  2. Article
  3. The evolutionary genomics of meiotic drive.Molecular biology and evolution · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Pervasive suppressors halt the spread of selfishbioRxiv : the preprint server for biology · 2025
    Article
  8. Article
  9. Article
  10. Reenacting a mouse genetic evolutionary arms race in yeast reveals that SLXL1/SLX compete with SLY1/2 for binding to Spindlins.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  11. Article
  12. Article
  13. Article
  14. New perspectives on the causes and consequences of male meiotic drive.Current opinion in genetics & development · 2023
    Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Christopher EllisonDepartment of Integrative Biology, University of California Berkeley, Berkeley, California, United States of America.ORCID 0000-0002-0350-0962
Doris BachtrogDepartment of Integrative Biology, University of California Berkeley, Berkeley, California, United States of America.ORCID 0000-0001-9724-9467
University of California, Berkeley · US

Funding

The formation of Heterochromatin on evolving Y chromosomesR01GM101255 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI Doris Bachtrog · 2015 to 2026
$4.9M
The evolution of dosage compensation in DrosophilaR01GM076007 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BACHTROG, DORIS · 2006 to 2020
$3.6M
"Gene Trafficking on an Evolving X Chromosome in Drosophila"R01GM093182 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI BACHTROG, DORIS · 2010 to 2017
$2.7M
NIGMS NIH HHS R01 GM076007NIGMS NIH HHS R01 GM093182NIGMS NIH HHS R01 GM101255
6 · The paper itself

Abstract

Y chromosomes often contain amplified genes which can increase dosage of male fertility genes and counteract degeneration via gene conversion. Here we identify genes with increased copy number on both X and Y chromosomes in various species of Drosophila, a pattern that has previously been associated with sex chromosome drive involving the Slx and Sly gene families in mice. We show that recurrent X/Y co-amplification appears to be an important evolutionary force that has shaped gene content evolution of sex chromosomes in Drosophila. We demonstrate that convergent acquisition and amplification of testis expressed gene families are common on Drosophila sex chromosomes, and especially on recently formed ones, and we carefully characterize one putative novel X/Y co-amplification system. We find that co-amplification of the S-Lap1/GAPsec gene pair on both the X and the Y chromosome occurred independently several times in members of the D. obscura group, where this normally autosomal gene pair is sex-linked due to a sex chromosome-autosome fusion. We explore several evolutionary scenarios that would explain this pattern of co-amplification. Investigation of gene expression and short RNA profiles at the S-Lap1/GAPsec system suggest that, like Slx/Sly in mice, these genes may be remnants of a cryptic sex chromosome drive system, however additional transgenic experiments will be necessary to validate this model. Regardless of whether sex chromosome drive is responsible for this co-amplification, our findings suggest that recurrent gene duplications between X and Y sex chromosomes could have a widespread effect on genomic and evolutionary patterns, including the epigenetic regulation of sex chromosomes, the distribution of sex-biased genes, and the evolution of hybrid sterility.

Indexed as

AnimalsComputational BiologyDrosophilaDrosophila ProteinsEvolution, MolecularGene AmplificationGene DuplicationMaleMultigene FamilyPhylogenyX ChromosomeY ChromosomeDrosophila Proteins

Identifiers

PMID31329593
PMCPMC6690552
OpenAlexW2963295507

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.