Evidence map›Paper›PMID 31327508›Full record

ArticleAmerican journal of human genetics2019

De Novo Variants in WDR37 Are Associated with Epilepsy, Colobomas, Dysmorphism, Developmental Delay, Intellectual Disability, and Cerebellar Hypoplasia.

Oguz Kanca, Jonathan C Andrews, Pei-Tseng Lee, Chirag Patel, Stephen R Braddock, Anne M Slavotinek, Julie S Cohen, Cynthia S Gubbels, Kimberly A Aldinger, Judy Williams and 18 more

Erratum issued Registry-linked trialOpen access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. It is linked to trial NCT02450851 (Clinical and Genetic Evaluation of Patients With Undiagnosed Disorders Through the Undiagnosed Diseases Network), which is not on this map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
5.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02450851 recruitingnot on this map

Clinical and Genetic Evaluation of Patients With Undiagnosed Disorders Through the Undiagnosed Diseases Network

TypeobservationalSponsorNational Human Genome Research Institute (NHGRI)Ran2015 to 2028Enrolled20,000ConditionsGenetic Disease
3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 56 citations in OpenAlex.

  1. Review
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  14. Review
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  17. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

28 authors at 19 institutions in 2 countries.

Oguz KancaDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Jonathan C AndrewsDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Pei-Tseng LeeDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Chirag PatelGenetic Health Queensland, Royal Brisbane and Women's Hospital, Brisbane, QLD 4029, Australia.
Stephen R BraddockDivision of Medical Genetics, SSM Health Cardinal Glennon Children's Medical Center, St. Louis, MO 63104, USA; Department of Pediatrics, Saint Louis University Hospital, St. Louis, MO 63104, USA.
Anne M SlavotinekDepartment of Pediatrics, University of California, San Francisco, CA 94143-2711, USA.
Julie S CohenDivision of Neurogenetics and Hugo W. Moser Research Institute, Kennedy Krieger Institute, Baltimore, MD 21205, USA.
Cynthia S GubbelsDivision of Genetics and Genomics, Boston Children's Hospital/Harvard Medical School/Broad Institute of MIT and Harvard, Boston, MA 02138, USA.
Kimberly A AldingerCenter for Integrative Brain Research, Seattle Children's Research Institute, Seattle, WA 98101, USA.
Judy WilliamsPaediatric Department, Bundaberg Hospital, Bundaberg, QLD 4670, Australia.
Maanasa IndaramDepartment of Ophthalmology, University of California, San Francisco, CA 94143-2711, USA.
Ali FatemiDivision of Neurogenetics and Hugo W. Moser Research Institute, Kennedy Krieger Institute, Baltimore, MD 21205, USA.
Timothy W YuDivision of Genetics and Genomics, Boston Children's Hospital/Harvard Medical School/Broad Institute of MIT and Harvard, Boston, MA 02138, USA.
Pankaj B AgrawalDivision of Newborn Medicine and Genetics and Genomics, Manton Center for Orphan Disease Research, Harvard Medical School, Boston, MA 02115, USA.
Gilbert VezinaDivision of Diagnostic Imaging & Radiology, Children's National Health System, 111 Michigan Ave. NW, Washington, DC 20010, USA.
Cas SimonsThe Institute of Molecular Bioscience, The University of Queensland, Brisbane, QLD 4072, Australia; Murdoch Childrens Research Institute, Melbourne, VIC 3052 Australia.
Joanna CrawfordThe Institute of Molecular Bioscience, The University of Queensland, Brisbane, QLD 4072, Australia.
C Christopher LauNIH Undiagnosed Diseases Program, Common Fund, Office of the Director, NIH, Bethesda, MD 20892, USA.
Undiagnosed Diseases NetworkUndiagnosed Diseases Network, Common Fund, Office of the Director, National Institutes of Health, Bethesda, MD 20892, USA.
Wendy K ChungDepartment of Pediatrics and Medicine, Columbia University, New York, NY 10032, USA.
Thomas C MarkelloNIH Undiagnosed Diseases Program, Common Fund, Office of the Director, NIH, Bethesda, MD 20892, USA; Office of the Clinical Director, National Human Genome Research Institute, NIH, Bethesda, MD 20892-1851, USA.
William B DobynsCenter for Integrative Brain Research, Seattle Children's Research Institute, Seattle, WA 98101, USA; Department of Pediatrics (Genetics), University of Washington, Seattle, WA 98195, USA; Department of Neurology, University of Washington, Seattle, WA 98195, USA.
David R AdamsNIH Undiagnosed Diseases Program, Common Fund, Office of the Director, NIH, Bethesda, MD 20892, USA; Office of the Clinical Director, National Human Genome Research Institute, NIH, Bethesda, MD 20892-1851, USA.
William A GahlNIH Undiagnosed Diseases Program, Common Fund, Office of the Director, NIH, Bethesda, MD 20892, USA; Office of the Clinical Director, National Human Genome Research Institute, NIH, Bethesda, MD 20892-1851, USA.
Michael F WanglerDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Program in Developmental Biology, Baylor College of Medicine, Houston, TX 77030, USA; Jan and Dan Duncan Neurological Research Institute, Texas Children's Hospital, Houston, TX 77030, USA.
Shinya YamamotoDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Program in Developmental Biology, Baylor College of Medicine, Houston, TX 77030, USA; Jan and Dan Duncan Neurological Research Institute, Texas Children's Hospital, Houston, TX 77030, USA; Department of Neuroscience, Baylor College of Medicine, Houston, TX 77030, USA.
Hugo J BellenDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Program in Developmental Biology, Baylor College of Medicine, Houston, TX 77030, USA; Jan and Dan Duncan Neurological Research Institute, Texas Children's Hospital, Houston, TX 77030, USA; Department of Neuroscience, Baylor College of Medicine, Houston, TX 77030, USA; Howard Hughes Medical Institute, Baylor College of Medicine, Houston, TX 77030, USA. Electronic address: hbellen@bcm.edu.
May Christine V MalicdanNIH Undiagnosed Diseases Program, Common Fund, Office of the Director, NIH, Bethesda, MD 20892, USA; Office of the Clinical Director, National Human Genome Research Institute, NIH, Bethesda, MD 20892-1851, USA. Electronic address: maychristine.malicdan@nih.gov.
Baylor College of Medicine · USOffice of the Director · USNational Human Genome Research Institute · USNeurological Research Institute · USBroad Institute · USTexas Children's Hospital · USUniversity of Queensland · AUDana-Farber/Boston Children's Cancer and Blood Disorders Center · USHoward Hughes Medical Institute · USIndigenous Wellbeing Centre · AUKennedy Krieger Institute · USUniversity of California, San Francisco · USBoston Children's Hospital · USCardinal Glennon Children’s Medical Center · USChildren's National · USColumbia University · USRoyal Brisbane and Women's Hospital · AUSaint Louis University Hospital · USUniversity of Washington · US

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Human Biochemical GeneticsZIAHG000215 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI GAHL, WILLIAM · 2009 to 2025
$72.6M
Transposon induced disruption of most Drosophila genesR01GM067858 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI BELLEN, HUGO J · 2003 to 2020
$15.7M
The Genetic Basis of Mid-Hindbrain MalformationsR01NS050375 · NINDS · UNIVERSITY OF MINNESOTA · PI DOBYNS, WILLIAM B. · 2005 to 2019
$9.9M
Zebrafish CoreU54NS093793 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI BELLEN, HUGO J · 2015 to 2022
$7.5M
Expansion and characterization of the Drosophila Toolkit to study SARS-CoV-2R24OD022005 · OD · BAYLOR COLLEGE OF MEDICINE · PI BELLEN, HUGO J · 2016 to 2023
$7.4M
Structural and behavioral impact of ASD-associated variants of NRXN1 in Drosophila melanogaster.F32NS110174 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI ANDREWS, JONATHAN · 2018 to 2020
$162k
Clinical Pursuits by the NHGRI Office of the Clinical DirectorZIAHG200402 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI GAHL, WILLIAM · 2019 to 2019
$122k
NCATS NIH HHS UL1 TR001863NIGMS NIH HHS R01 GM067858NIH HHS R24 OD022005NINDS NIH HHS F32 NS110174NINDS NIH HHS R01 NS050375NINDS NIH HHS U54 NS093793Wellcome Trust
6 · The paper itself

Abstract

WD40 repeat-containing proteins form a large family of proteins present in all eukaryotes. Here, we identified five pediatric probands with de novo variants in WDR37, which encodes a member of the WD40 repeat protein family. Two probands shared one variant and the others have variants in nearby amino acids outside the WD40 repeats. The probands exhibited shared phenotypes of epilepsy, colobomas, facial dysmorphology reminiscent of CHARGE syndrome, developmental delay and intellectual disability, and cerebellar hypoplasia. The WDR37 protein is highly conserved in vertebrate and invertebrate model organisms and is currently not associated with a human disease. We generated a null allele of the single Drosophila ortholog to gain functional insights and replaced the coding region of the fly gene CG12333/wdr37 with GAL4. These flies are homozygous viable but display severe bang sensitivity, a phenotype associated with seizures in flies. Additionally, the mutant flies fall when climbing the walls of the vials, suggesting a defect in grip strength, and repeat the cycle of climbing and falling. Similar to wall clinging defect, mutant males often lose grip of the female abdomen during copulation. These phenotypes are rescued by using the GAL4 in the CG12333/wdr37 locus to drive the UAS-human reference WDR37 cDNA. The two variants found in three human subjects failed to rescue these phenotypes, suggesting that these alleles severely affect the function of this protein. Taken together, our data suggest that variants in WDR37 underlie a novel syndromic neurological disorder.

Indexed as

MutationAdultAmino Acid SequenceAnimalsBody Dysmorphic DisordersCerebellumChildColobomaDevelopmental DisabilitiesDrosophila melanogasterEpilepsyFemaleHumansInfantInfant, NewbornIntellectual DisabilityMicrofilament Proteinsbang sensitivityCG12333DrosophilaWD40 repeatswdr37WDR37 domains

Identifiers

PMID31327508
PMCPMC6699142
OpenAlexW2958925172

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.