Evidence map›Paper›PMID 31325143›Full record

ArticleMolecular biology reports2019

Genetic diversity and population structure of the threatened chocolate mahseer (Neolissochilus hexagonolepis McClelland 1839) based on SSR markers: implications for conservation management in Northeast India.

Lata Sharma, Shahnawaz Ali, C Siva, Rohit Kumar, Ashoktaru Barat, Prabhati K Sahoo, Veena Pande

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Article in Molecular biology reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

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4citing papers in PubMed
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1 · What the graph read from it

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3 · Its place in the literature

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4 citing papers in PubMed.

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  4. Characterization of the complete mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2023
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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Lata SharmaICAR-Directorate of Coldwater Fisheries Research, Bhimtal, Nainital, Uttarakhand, 263136, India.ORCID http://orcid.org/0000-0002-9406-7702
Shahnawaz AliICAR-Directorate of Coldwater Fisheries Research, Bhimtal, Nainital, Uttarakhand, 263136, India. alicife@gmail.com.ORCID http://orcid.org/0000-0002-4827-5199
C SivaICAR-Directorate of Coldwater Fisheries Research, Bhimtal, Nainital, Uttarakhand, 263136, India.ORCID http://orcid.org/0000-0003-4530-6292
Rohit KumarAdvanced Centre for Treatment, Research and Education in Cancer (ACTREC), Kharghar, Navi Mumbai, Maharashtra, 410210, India.ORCID http://orcid.org/0000-0003-4804-403X
Ashoktaru BaratICAR-Central Institute of Freshwater Aquaculture, Kausalyaganga, Bhubaneswar, Odisha, 751002, India.
Prabhati K SahooICAR-Central Institute of Freshwater Aquaculture, Kausalyaganga, Bhubaneswar, Odisha, 751002, India.
Veena PandeDepartment of Biotechnology, Kumaun University, Nainital, Uttarakhand, 263136, India.

Funding

ICAR-DCFR FGS/ICAR-DCFR/2014-19
6 · The paper itself

Abstract

Neolissochilus hexagonolepis (MacClend 1839), commonly known as chocolate mahseer, is an ecologically threatened fish species. The species is reported from Southeast Asia and in India, it is distributed across the Northeast region. The present study was carried out to develop species-specific novel microsatellite markers using next-generation sequencing and to assess the genetic diversity of wild chocolate mahseer populations distributed through Northeastern India. A total of 25 polymorphic loci (mean PIC = 0.933) were amplified in 194 individuals belonging to seven different populations. We observed high genetic diversity across the loci with mean observed (Ho) and expected heterozygosity (He) of 0.557 and 0.939 respectively. The studied loci didn't show significant deviation from Hardy-Weinberg equilibrium. Genetic analyses indicate substantial pairwise Nei's genetic distance and moderate to high levels of genetic differentiation among populations (mean F

Indexed as

Microsatellite RepeatsAnimalsCluster AnalysisCyprinidaeGenetic MarkersGenetic VariationHigh-Throughput Nucleotide SequencingIndiaPhylogenyPopulation DynamicsSpecies SpecificityGenetic MarkersConservationNext-generation sequencingPopulation structureSSR

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.