Evidence map›Paper›PMID 31325057›Full record

ArticleJournal of plant research2019

An anthocyanin marker for direct visualization of plant transformation and its use to study nitrogen-fixing nodule development.

Senlei Zhang, Éva Kondorosi, Attila Kereszt

Abstract read
In one paragraph

Article in Journal of plant research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Senlei ZhangInstitute of Plant Biology, Biological Research Centre, Hungarian Academy of Sciences, Temesvári körút 62, 6726, Szeged, Hungary.
Éva KondorosiInstitute of Plant Biology, Biological Research Centre, Hungarian Academy of Sciences, Temesvári körút 62, 6726, Szeged, Hungary.
Attila KeresztInstitute of Plant Biology, Biological Research Centre, Hungarian Academy of Sciences, Temesvári körút 62, 6726, Szeged, Hungary. kereszta@gmail.com.ORCID http://orcid.org/0000-0002-4421-6554

Funding

Hungarian National Office for Research, Development and Innovation GINOP 2.3.2-15-2016-00014Hungarian National Office for Research, Development and Innovation GINOP 2.3.2-15-2016-00015Hungarian National Office for Research, Development and Innovation OTKA 120120/119652
6 · The paper itself

Abstract

The development and functioning of the nitrogen fixing symbiosis between legume plants and soil bacteria collectively called rhizobia requires continuous chemical dialogue between the partners using different molecules such as flavonoids, lipo-chitooligosaccharides, polysaccharides and peptides. Agrobacterium rhizogenes mediated hairy root transformation of legumes is widely used to study the function of plant genes involved in the process. The identification of transgenic plant tissues is based on antibiotics/herbicide selection and/or the detection of different reporter genes that usually require special equipment such as fluorescent microscopes or destructive techniques and chemicals to visualize enzymatic activity. Here, we developed and efficiently used in hairy root experiments binary vectors containing the MtLAP1 gene driven by constitutive and tissue-specific promoters that facilitate the production of purple colored anthocyanins in transgenic tissues and thus allowing the identification of transformed roots by naked eye. Anthocyanin producing roots were able to establish effective symbiosis with rhizobia. Moreover, it was shown that species-specific allelic variations and a mutation preventing posttranslational acetyl modification of an essential nodule-specific cysteine-rich peptide, NCR169, do not affect the symbiotic interaction of Medicago truncatula cv. Jemalong with Sinorhizobium medicae strain WSM419. Based on the experiments, it could be concluded that it is preferable to use the vectors with tissue-specific promoters that restrict anthocyanin production to the root vasculature for studying biotic interactions of the roots such as symbiotic nitrogen fixation or mycorrhizal symbiosis.

Indexed as

Nitrogen FixationSymbiosisAgrobacteriumAnthocyaninsBiomarkersMedicago truncatulaPlant ProteinsPlant RootsPlants, Genetically ModifiedRoot Nodules, PlantTransformation, GeneticAnthocyaninsBiomarkersPlant ProteinsHairy rootLegume symbiosisNodule-specific cysteine-rich (NCR) peptidesReporter geneTransgenic tissue

Identifiers

PMID31325057
PMCPMC6713694

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.