Evidence map›Paper›PMID 31324173›Full record

ArticleBMC cancer2019

Quantifying Argonaute 2 (Ago2) expression to stratify breast cancer.

M C Casey, A Prakash, E Holian, A McGuire, O Kalinina, A Shalaby, C Curran, M Webber, G Callagy, E Bourke and 2 more

Open access · goldAbstract read
In one paragraph

Article in BMC cancer, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 35 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

M C CaseyDiscipline of Surgery, School of Medicine, Lambe institute for Translational Research, National University of Ireland, Galway, Ireland.
A PrakashDiscipline of Pathology, School of Medicine, Lambe Institute for Translational Research, National University of Ireland, Galway, Ireland.
E HolianSchool of Mathematics, Statistics and Applied Mathematics, National University of Ireland, Galway, Ireland.
A McGuireDiscipline of Surgery, School of Medicine, Lambe institute for Translational Research, National University of Ireland, Galway, Ireland.
O KalininaSchool of Mathematics, Statistics and Applied Mathematics, National University of Ireland, Galway, Ireland.
A ShalabyDiscipline of Pathology, School of Medicine, Lambe Institute for Translational Research, National University of Ireland, Galway, Ireland.
C CurranDiscipline of Surgery, School of Medicine, Lambe institute for Translational Research, National University of Ireland, Galway, Ireland.
M WebberDiscipline of Pathology, School of Medicine, Lambe Institute for Translational Research, National University of Ireland, Galway, Ireland.
G CallagyDiscipline of Pathology, School of Medicine, Lambe Institute for Translational Research, National University of Ireland, Galway, Ireland.
E BourkeDiscipline of Pathology, School of Medicine, Lambe Institute for Translational Research, National University of Ireland, Galway, Ireland.
M J KerinDiscipline of Surgery, School of Medicine, Lambe institute for Translational Research, National University of Ireland, Galway, Ireland.
J A BrownDiscipline of Surgery, School of Medicine, Lambe institute for Translational Research, National University of Ireland, Galway, Ireland. james.brown@nuigalway.ie.ORCID http://orcid.org/0000-0002-3155-0334
Ollscoil na Gaillimhe – University of Galway · IE

Funding

Breast Cancer Research .
6 · The paper itself

Abstract

backgroundArgonaute-2 (Ago2) is an essential component of microRNA biogenesis implicated in tumourigenesis. However Ago2 expression and localisation in breast cancer remains undetermined. The aim was to define Ago2 expression (mRNA and protein) and localisation in breast cancer, and investigate associations with clinicopathological details.

methodsAgo2 protein was stained in breast cancer cell lines and tissue microarrays (TMAs), with intensity and localization assessed. Staining intensity was correlated with clinicopathological details. Using independent databases, Ago2 mRNA expression and gene alterations in breast cancer were investigated.

resultsIn the breast cancer TMAs, 4 distinct staining intensities were observed (Negative, Weak, Moderate, Strong), with 64.2% of samples stained weak or negatively for Ago2 protein. An association was found between strong Ago2 staining and, the Her2 positive or basal subtypes, and between Ago2 intensity and receptor status (Estrogen or Progesterone). In tumours Ago2 mRNA expression correlated with reduced relapse free survival. Conversely, Ago2 mRNA was expressed significantly lower in SK-BR-3 (HER2 positive) and BT-20 (Basal/Triple negative) cell lines. Interestingly, high levels of Ago2 gene amplification (10-27%) were observed in breast cancer across multiple patient datasets. Importantly, knowledge of Ago2 expression improves predictions of breast cancer subtype by 20%, ER status by 15.7% and PR status by 17.5%.

conclusionsQuantification of Ago2 improves the stratification of breast cancer and suggests a differential role for Ago2 in breast cancer subtypes, based on levels and cellular localisation. Further investigation of the mechanisms affecting Ago2 dysregulation will reveal insights into the molecular differences underpinning breast cancer subtypes.

Indexed as

Argonaute ProteinsBiomarkers, TumorBiopsyBreast NeoplasmsCell Line, TumorCohort StudiesDisease-Free SurvivalErb-b2 Receptor Tyrosine KinasesFemaleGene AmplificationGene ExpressionHumansKaplan-Meier EstimateMiddle AgedNeoplasm StagingReceptors, EstrogenAGO2 protein, humanArgonaute ProteinsBiomarkers, TumorERBB2 protein, humanErb-b2 Receptor Tyrosine KinasesReceptors, EstrogenReceptors, ProgesteroneRNA, MessengerAgo2AmplificationArgonaute 2BiomarkerBreastCancerCytoplasmicDFSDiseaseEIF2C2ExpressionGeneIHCIntensitymicroRNAMidbodymiRNAmRNAPatternRelapseRFSStainingSurvivalTumour

Identifiers

PMID31324173
PMCPMC6642579
OpenAlexW2963682945

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.