Evidence map›Paper›PMID 31324143›Full record

ArticleBMC evolutionary biology2019

Lacking catalase, a protistan parasite draws on its photosynthetic ancestry to complete an antioxidant repertoire with ascorbate peroxidase.

Eric J Schott, Santiago Di Lella, Tsvetan R Bachvaroff, L Mario Amzel, Gerardo R Vasta

Open access · goldAbstract read
In one paragraph

Article in BMC evolutionary biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Perkinsus marinus in bioreactor: growth and a cost-reduced growth medium.Journal of industrial microbiology & biotechnology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Eric J SchottDepartment of Microbiology & Immunology, University of Maryland School of Medicine, and Institute of Marine and Environmental Technology, 701 E. Pratt Street, Baltimore, MD, 21202, USA.
Santiago Di LellaInstituto de Química Biológica - Ciencias Exactas y Naturales, IQUIBICEN / CONICET, Departamento de Química Biológica, Fac. de Cs. Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria, Capital Federal, Argentina.
Tsvetan R BachvaroffUniversity of Maryland Center for Environmental Science, Institute of Marine and Environmental Technology, 701 E. Pratt Street, Baltimore, MD, 21202, USA.
L Mario AmzelDepartment of Biophysics & Biophysical Chemistry, The Johns Hopkins University School of Medicine, 725 North Wolfe Street, Baltimore, MD, 21205, USA.
Gerardo R VastaDepartment of Microbiology & Immunology, University of Maryland School of Medicine, and Institute of Marine and Environmental Technology, 701 E. Pratt Street, Baltimore, MD, 21202, USA. GVasta@som.umaryland.edu.
University of Maryland Center for Environmental Science · USJohns Hopkins University · USUniversity of Buenos Aires · ARUniversity of Maryland, Baltimore · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAntioxidative enzymes contribute to a parasite's ability to counteract the host's intracellular killing mechanisms. The facultative intracellular oyster parasite, Perkinsus marinus, a sister taxon to dinoflagellates and apicomplexans, is responsible for mortalities of oysters along the Atlantic coast of North America. Parasite trophozoites enter molluscan hemocytes by subverting the phagocytic response while inhibiting the typical respiratory burst. Because P. marinus lacks catalase, the mechanism(s) by which the parasite evade the toxic effects of hydrogen peroxide had remained unclear. We previously found that P. marinus displays an ascorbate-dependent peroxidase (APX) activity typical of photosynthetic eukaryotes. Like other alveolates, the evolutionary history of P. marinus includes multiple endosymbiotic events. The discovery of APX in P. marinus raised the questions: From which ancestral lineage is this APX derived, and what role does it play in the parasite's life history?

resultsPurification of P. marinus cytosolic APX activity identified a 32 kDa protein. Amplification of parasite cDNA with oligonucleotides corresponding to peptides of the purified protein revealed two putative APX-encoding genes, designated PmAPX1 and PmAPX2. The predicted proteins are 93% identical, and PmAPX2 carries a 30 amino acid N-terminal extension relative to PmAPX1. The P. marinus APX proteins are similar to predicted APX proteins of dinoflagellates, and they more closely resemble chloroplastic than cytosolic APX enzymes of plants. Immunofluorescence for PmAPX1 and PmAPX2 shows that PmAPX1 is cytoplasmic, while PmAPX2 is localized to the periphery of the central vacuole. Three-dimensional modeling of the predicted proteins shows pronounced differences in surface charge of PmAPX1 and PmAPX2 in the vicinity of the aperture that provides access to the heme and active site.

conclusionsPmAPX1 and PmAPX2 phylogenetic analysis suggests that they are derived from a plant ancestor. Plant ancestry is further supported by the presence of ascorbate synthesis genes in the P. marinus genome that are similar to those in plants. The localizations and 3D structures of the two APX isoforms suggest that APX fulfills multiple functions in P. marinus within two compartments. The possible role of APX in free-living and parasitic stages of the life history of P. marinus is discussed.

Indexed as

PhotosynthesisAmino Acid SequenceAnimalsAntioxidantsAscorbate PeroxidasesCatalaseHydrogen PeroxideKineticsModels, MolecularParasitesPhylogenyStructural Homology, ProteinSubcellular FractionsAntioxidantsAscorbate PeroxidasesCatalaseHydrogen PeroxideAscorbate peroxidaseAscorbic acidHydrogen peroxideOxidative stressParasitePerkinsus marinusVacuole

Identifiers

PMID31324143
PMCPMC6642578
OpenAlexW2964307451

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.