Evidence map›Paper›PMID 31323081›Full record

ArticleGenetics and molecular biology

The chloroplast genome of the desiccation-tolerant moss Pseudocrossidium replicatum (Taylor) R.H. Zander.

Miguel A Cevallos, Gabriela Guerrero, Selma Ríos, Analilia Arroyo, Miguel Angel Villalobos, Helena Porta

Open access · goldAbstract read
In one paragraph

Article in Genetics and molecular biology. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Characterization of the complete chloroplast genome ofMitochondrial DNA. Part B, Resources · 2024
    Article
  5. Complete chloroplast and mitochondrial genomes ofMitochondrial DNA. Part B, Resources · 2023
    Article
  6. The complete chloroplast and mitochondrial genomes ofMitochondrial DNA. Part B, Resources · 2022
    Article
  7. Article
  8. The complete chloroplast genome of the moss,Mitochondrial DNA. Part B, Resources · 2020
    Article
  9. The mitogenome ofMitochondrial DNA. Part B, Resources · 2020
    Article
  10. The complete chloroplast genome of a moss KoreaMitochondrial DNA. Part B, Resources · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Miguel A CevallosCentro de Ciencias Genómicas, Programa de Genómica Evolutiva, Universidad Nacional Autónoma de México, Cuernavaca, Morelos, Mexico.ORCID http://orcid.org/0000-0002-0447-812X
Gabriela GuerreroCentro de Ciencias Genómicas, Programa de Genómica Evolutiva, Universidad Nacional Autónoma de México, Cuernavaca, Morelos, Mexico.ORCID http://orcid.org/0000-0001-7200-2863
Selma RíosCentro de Investigación en Biotecnología Aplicada, Laboratorio de Biología Molecular y Biotecnología de Plantas, Instituto Politécnico Nacional. Tepetitla de Lardizabal, Tlaxcala, Mexico.ORCID http://orcid.org/0000-0003-3363-650X
Analilia ArroyoCentro de Investigación en Biotecnología Aplicada, Laboratorio de Biología Molecular y Biotecnología de Plantas, Instituto Politécnico Nacional. Tepetitla de Lardizabal, Tlaxcala, Mexico.ORCID http://orcid.org/0000-0002-3055-7518
Miguel Angel VillalobosCentro de Investigación en Biotecnología Aplicada, Laboratorio de Biología Molecular y Biotecnología de Plantas, Instituto Politécnico Nacional. Tepetitla de Lardizabal, Tlaxcala, Mexico.ORCID http://orcid.org/0000-0002-8640-342X
Helena PortaInstituto de Biotecnología, Departamento de Biología Molecular de Plantas, Universidad Nacional Autónoma de México, Cuernavaca, Morelos, Mexico.ORCID http://orcid.org/0000-0002-6180-3128
Instituto Politécnico Nacional · MXUniversidad Nacional Autónoma de México · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mosses in conjunction with hornworts and liverworts are collectively referred to as bryophytes. These seedless, nonvascular plants are the closest extant relatives of early terrestrial plants and their study is essential to understand the evolutionary first steps of land plants. Here we report the complete chloroplast (cp) genome sequence of Pseudocrossidium replicatum, a moss belonging to the Pottiaceae family that is common in the central highlands of Mexico, in South America, in southern USA, and in Kenia. The cp genome (plastome) of P. replicatum is 123,512 bp in size, comprising inverted repeats of 9,886 bp and single-copy regions of 85,146 bp (LSC) and 18,594 bp (SSC). The plastome encodes 82 different proteins, 31 different tRNAs, and 4 different rRNAs. Phylogenetic analysis using 16 cp protein-coding genes demonstrated that P. replicatum is closely related to Syntrichia ruralis, and the most basal mosses are Takakia lepidozioides followed by Sphagnum palustre. Our analysis indicates that during the evolution of the mosses' plastome, eight genes were lost. The complete plastome sequence reported here can be useful in evolutionary and population genetics.

Identifiers

PMID31323081
PMCPMC6726147
OpenAlexW2958670749

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.