Evidence map›Paper›PMID 31323023›Full record

ArticlePloS one2019

Continuous evolution of influenza A viruses of swine from 2013 to 2015 in Guangdong, China.

Zhenpeng Cao, Weijie Zeng, Xiangqi Hao, Junming Huang, Mengkai Cai, Pei Zhou, Guihong Zhang

Abstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

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  16. Prevalent Eurasian avian-like H1N1 swine influenza virus with 2009 pandemic viral genes facilitating human infection.Proceedings of the National Academy of Sciences of the United States of America · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Zhenpeng CaoCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, China.
Weijie ZengCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, China.
Xiangqi HaoCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, China.
Junming HuangCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, China.
Mengkai CaiCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, China.
Pei ZhouCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, China.
Guihong ZhangCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, China.ORCID 0000-0003-1236-1850

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Southern China is considered an important source of influenza virus pandemics because of the large, diverse viral reservoirs in poultry and swine. To examine the trend in influenza A virus of swine (IAV-S), an active surveillance program has been conducted from 2013 to 2015 in Guangdong, China. The phylogenetic analyses showed that the external genes of the isolates were assigned to the Eurasian avian-like swine (EA) H1N1 and/or human-like H3N2 lineages with multiple substitutions, indicating a notable genetic shift. Moreover, the internal genes derived from different origins (PB2, PB1, PA, NP: pdm/09 (pandemic influenza virus 2009)-origin, M: pdm/09- or EA-origin, NS: North American Triple Reassortant (TR)-origin have become the dominant backbone of IAV-S in southern China. According to the origins of the eight gene segments, the isolates can be categorized into five genotypes. The results of mice experiment showed that the YJ4 (genotype 1) and DG2 (genotype 4) are the most pathogenic to mice, and the viruses are observed in kidneys and brains, indicating the systemic infection. The alterations of the IAV-S gene composition supported the continued implementation of the intensive surveillance of IAV-S and the greater attention focused on potential shifts toward transmission to humans.

Indexed as

Evolution, MolecularGenotypeAnimalsChinaInfluenza A Virus, H1N1 SubtypeInfluenza A Virus, H3N2 SubtypeOrthomyxoviridae InfectionsSwineSwine Diseases

Identifiers

PMID31323023
PMCPMC6641472

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.