Evidence map›Paper›PMID 31320922›Full record

ArticleSource code for biology and medicine2019

Social support for collaboration and group awareness in life science research teams.

Delfina Malandrino, Ilaria Manno, Alberto Negro, Andrea Petta, Luigi Serra, Concita Cantarella, Vittorio Scarano

Abstract read
In one paragraph

Article in Source code for biology and medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Delfina MalandrinoDipartimento di Informatica, Università degli Studi di Salerno, Via Giovanni Paolo II, Fisciano (SA), Italy.ORCID 0000-0003-2693-0196
Ilaria MannoDipartimento di Informatica, Università degli Studi di Salerno, Via Giovanni Paolo II, Fisciano (SA), Italy.
Alberto NegroDipartimento di Informatica, Università degli Studi di Salerno, Via Giovanni Paolo II, Fisciano (SA), Italy.
Andrea PettaDipartimento di Informatica, Università degli Studi di Salerno, Via Giovanni Paolo II, Fisciano (SA), Italy.
Luigi SerraDipartimento di Informatica, Università degli Studi di Salerno, Via Giovanni Paolo II, Fisciano (SA), Italy.
Concita Cantarella2Consiglio per la Ricerca in Agricoltura e l'Analisi dell'Economia Agraria, Pontecagnano (SA), Salerno, Italy.
Vittorio ScaranoDipartimento di Informatica, Università degli Studi di Salerno, Via Giovanni Paolo II, Fisciano (SA), Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundNext-generation sequencing (NGS) technologies have revolutionarily reshaped the landscape of '-omics' research areas. They produce a plethora of information requiring specific knowledge in sample preparation, analysis and characterization. Additionally, expertise and competencies are required when using bioinformatics tools and methods for efficient analysis, interpretation, and visualization of data. These skills are rarely covered in a single laboratory. More often the samples are isolated and purified in a first laboratory, sequencing is performed by a private company or a specialized lab, while the produced data are analyzed by a third group of researchers. In this scenario, the support, the communication, and the information sharing among researchers represent the key points to build a common knowledge and to meet the project objectives.

resultsWe present ElGalaxy, a system designed and developed to support collaboration and information sharing among researchers. Specifically, we integrated collaborative functionalities within an application usually adopted by Life Science researchers. ElGalaxy, therefore, is the result of the integration of Galaxy, i.e., a Workflow Management System, with Elgg, i.e., a Social Network Engine.

conclusionsElGalaxy enables scientists, that work on the same experiment, to collaborate and share information, to discuss about methods, and to evaluate results of the individual steps, as well as of entire activities, performed during their experiments. ElGalaxy also allows a greater team awareness, especially when experiments are carried out with researchers which belong to different and distributed research centers.

Indexed as

Life science teams collaborationSocial interactionsWorking group awareness

Identifiers

PMID31320922
PMCPMC6615102

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.