Evidence map›Paper›PMID 31320556›Full record

ArticleScience (New York, N.Y.)2019

Cortical layer-specific critical dynamics triggering perception.

James H Marshel, Yoon Seok Kim, Timothy A Machado, Sean Quirin, Brandon Benson, Jonathan Kadmon, Cephra Raja, Adelaida Chibukhchyan, Charu Ramakrishnan, Masatoshi Inoue and 6 more

Abstract read
In one paragraph

Article in Science (New York, N.Y.), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 387 papers.

0numbers the graph read from it
0cells of the map it votes in
387citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

387 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. The Importance of Synchrony in the Neural Control of Movement.bioRxiv : the preprint server for biology · 2026
    Article
  19. Article
  20. Article

327 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors.

James H MarshelCNC Department, Stanford University, Stanford, CA 94305, USA.ORCID 0000-0003-3517-8493
Yoon Seok KimDepartment of Bioengineering, Stanford University, Stanford, CA 94305, USA.ORCID 0000-0003-3332-0652
Timothy A MachadoCNC Department, Stanford University, Stanford, CA 94305, USA.ORCID 0000-0003-3762-1460
Sean QuirinCNC Department, Stanford University, Stanford, CA 94305, USA.ORCID 0000-0001-7355-9305
Brandon BensonDepartment of Applied Physics, Stanford University, Stanford, CA 94305, USA.ORCID 0000-0003-3719-4358
Jonathan KadmonDepartment of Applied Physics, Stanford University, Stanford, CA 94305, USA.ORCID 0000-0003-3970-5684
Cephra RajaDepartment of Bioengineering, Stanford University, Stanford, CA 94305, USA.
Adelaida ChibukhchyanDepartment of Bioengineering, Stanford University, Stanford, CA 94305, USA.ORCID 0000-0002-1470-8347
Charu RamakrishnanDepartment of Bioengineering, Stanford University, Stanford, CA 94305, USA.ORCID 0000-0002-3474-6332
Masatoshi InoueDepartment of Bioengineering, Stanford University, Stanford, CA 94305, USA.ORCID 0000-0001-5077-0052
Janelle C ShaneBoulder Nonlinear Systems, Lafayette, CO 80026, USA.ORCID 0000-0001-6564-0314
Douglas J McKnightBoulder Nonlinear Systems, Lafayette, CO 80026, USA.ORCID 0000-0003-1300-7159
Susumu YoshizawaDepartment of Natural Environmental Studies, Graduate School of Frontier Sciences, University of Tokyo, Kashiwa 277-8564, Japan.ORCID 0000-0001-9667-6010
Hideaki E KatoDepartment of Molecular and Cellular Physiology, Stanford University, Stanford, CA 94305, USA.ORCID 0000-0002-1941-5535
Surya GanguliDepartment of Applied Physics, Stanford University, Stanford, CA 94305, USA.
Karl DeisserothCNC Department, Stanford University, Stanford, CA 94305, USA. deissero@stanford.edu.ORCID 0000-0001-9440-3967

Funding

Training CoreP50DA042012 · NIDA · STANFORD UNIVERSITY · PI Karl A. Deisseroth · 2017 to 2026
$27.1M
Channel Structure-Based Tools for Precise Interrogation of Circuitry and BehaviorR37MH075957 · NIMH · STANFORD UNIVERSITY · PI DEISSEROTH, KARL A. · 2013 to 2022
$7.3M
Structural and molecular identification of circuitry underlying joint processing of motivation and aversionR37DA035377 · NIDA · STANFORD UNIVERSITY · PI DEISSEROTH, KARL A. · 2013 to 2022
$6.2M
2016 Optogenetic Approaches to Understanding Neural Circuits & Behavior Gordon Research ConferenceR13DA041796 · NIDA · GORDON RESEARCH CONFERENCES · PI DEISSEROTH, KARL A. · 2016 to 2016
$26k
Howard Hughes Medical InstituteNIDA NIH HHS P50 DA042012NIDA NIH HHS R13 DA041796NIDA NIH HHS R37 DA035377NIMH NIH HHS R37 MH075957Wellcome Trust
6 · The paper itself

Abstract

Perceptual experiences may arise from neuronal activity patterns in mammalian neocortex. We probed mouse neocortex during visual discrimination using a red-shifted channelrhodopsin (ChRmine, discovered through structure-guided genome mining) alongside multiplexed multiphoton-holography (MultiSLM), achieving control of individually specified neurons spanning large cortical volumes with millisecond precision. Stimulating a critical number of stimulus-orientation-selective neurons drove widespread recruitment of functionally related neurons, a process enhanced by (but not requiring) orientation-discrimination task learning. Optogenetic targeting of orientation-selective ensembles elicited correct behavioral discrimination. Cortical layer-specific dynamics were apparent, as emergent neuronal activity asymmetrically propagated from layer 2/3 to layer 5, and smaller layer 5 ensembles were as effective as larger layer 2/3 ensembles in eliciting orientation discrimination behavior. Population dynamics emerging after optogenetic stimulation both correctly predicted behavior and resembled natural internal representations of visual stimuli at cellular resolution over volumes of cortex.

Indexed as

AnimalsAquatic OrganismsCells, CulturedChannelrhodopsinsHolographyMiceMolecular ImagingNeocortexNeuronsOpsinsOptogeneticsOrientationPhotic StimulationVisual PerceptionChannelrhodopsinsOpsins

Identifiers

PMID31320556
PMCPMC6711485

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.