Evidence map›Paper›PMID 31319022›Full record

Trial reportMolecular genetics & genomic medicine2019

"Missing mutations" in MPS I: Identification of two novel copy number variations by an IDUA-specific in house MLPA assay.

Amir Jahic, Sven Günther, Nicole Muschol, Barbro Fossøy Stadheim, Øivind Braaten, Hanne Kjensli Hyldebrandt, Gé-Ann Kuiper, Karen Tylee, Frits A Wijburg, Christian Beetz

Open access · goldAbstract readClinical Trial
In one paragraph

Trial report in Molecular genetics & genomic medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 4 citations in OpenAlex.

  1. Trial
  2. Article
  3. MPSI Manifestations and Treatment Outcome: Skeletal Focus.International journal of molecular sciences · 2022
    Review
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 4 countries.

Amir JahicInstitute of Clinical Chemistry and Laboratory Diagnostics, Jena University Hospital, Jena, Germany.ORCID 0000-0001-5967-6732
Sven GüntherInstitute of Clinical Chemistry and Laboratory Diagnostics, Jena University Hospital, Jena, Germany.
Nicole MuscholDepartment of Pediatrics, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Barbro Fossøy StadheimDepartment of Clinical Genetics, Oslo University Hospital, Oslo, Norway.
Øivind BraatenDepartment of Clinical Genetics, Oslo University Hospital, Oslo, Norway.
Hanne Kjensli HyldebrandtDepartment of Clinical Genetics, Oslo University Hospital, Oslo, Norway.
Gé-Ann KuiperPediatric Metabolic Diseases, Amsterdam UMC, University of Amsterdam, Academic Medical Center (AMC), Amsterdam, Netherlands.
Karen TyleeManchester Center for Genomic Medicine, St Mary's Hospital, Manchester, UK.
Frits A WijburgPediatric Metabolic Diseases, Amsterdam UMC, University of Amsterdam, Academic Medical Center (AMC), Amsterdam, Netherlands.
Christian BeetzInstitute of Clinical Chemistry and Laboratory Diagnostics, Jena University Hospital, Jena, Germany.
Jena University Hospital · DEOslo University Hospital · NOAmsterdam UMC Location University of Amsterdam · NLSt Mary's Hospital · GBUniversität Hamburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMucopolysaccharidosis type I (MPS I) is a rare, recessively inherited lysosomal storage disorder, characterized by progressive multi-systemic disease. It is caused by a reduced or absent alpha-l iduronidase (IDUA) enzyme activity secondary to biallelic loss-of-function variants in the IDUA. Over 200 causative variants in IDUA have been identified. Nevertheless, there is a fraction of MPS I patients with only a single mutated IDUA allele detectable.

methodsAs genetic testing of MPS I is usually based on sequencing methods, copy number variations (CNVs) in IDUA can be missed and therefore presumably remain underdiagnosed. The aim of this study was the detection of CNVs using an IDUA-specific in house multiplex ligation-dependent probe amplification (MLPA) assay.

resultsA total of five unrelated MPS I patient samples were re-analyzed after only a single heterozygous IDUA mutation c.979G>C (p.A327P), c.1469T>C (p.L490P), c.1598C>G (p.P533R), c.1205G>A (p.W402X), c.973-7C>G (p.?) could be identified. We detected a novel splice site variant c.973-7C>G (p.?), as well as two novel CNVs, a large deletion of IDUA exon 14 and 3'UTR c.(1828 + 1_1829-1)_(*1963_?)del, and a large duplication extending from IDUA exon 2 to intron 12 c.(157 + 1_158-1)_(1727 + 1_1728-1)dup.

conclusionTogether with the CNVs we previously identified, a total of four pathogenic IDUA CNVs have now been reported.

Indexed as

DNA Copy Number VariationsMutationFemaleHumansIduronidaseLigase Chain ReactionMaleMucopolysaccharidosis IIDUA protein, humanIduronidasecopy number variationsdeletionduplicationIDUAMLPA

Identifiers

PMID31319022
PMCPMC6732313
OpenAlexW2963381243

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.