Evidence map›Paper›PMID 31316092›Full record

ArticleScientific reports2019

Gene Expression Analyses in Non Muscle Invasive Bladder Cancer Reveals a Role for Alternative Splicing and Tp53 Status.

Marta Dueñas, Andrés Pérez-Figueroa, Carla Oliveira, Cristian Suárez-Cabrera, Abel Sousa, Patricia Oliveira, Felipe Villacampa, Jesús M Paramio, Mónica Martínez-Fernández

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Nitrated Polycyclic Aromatic Hydrocarbon (Nitro-PAH) Signatures and Somatic Mutations in Diesel Exhaust-Exposed Bladder Tumors.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2023
    Article
  6. Article
  7. Article
  8. Article
  9. Frontiers in genetics · 2022
    Article
  10. Article
  11. Article
  12. Aging · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Marta DueñasMolecular Oncology Unit, CIEMAT, Avda Complutense 40, 28040, Madrid, Spain.
Andrés Pérez-FigueroaPhylogenomics Lab. Department of Biochemistry, Genetics an Immunology & Biomedical Research Center (CINBIO), University of Vigo, 36310, Vigo, Spain.ORCID http://orcid.org/0000-0002-7722-3697
Carla OliveiraExpression Regulation in Cancer Lab, Universidade do Porto, i3s & IPATIMUP. Rua Alfredo Allen, 208, 4200-135, Porto, Portugal.
Cristian Suárez-CabreraMolecular Oncology Unit, CIEMAT, Avda Complutense 40, 28040, Madrid, Spain.
Abel SousaExpression Regulation in Cancer Lab, Universidade do Porto, i3s & IPATIMUP. Rua Alfredo Allen, 208, 4200-135, Porto, Portugal.
Patricia OliveiraExpression Regulation in Cancer Lab, Universidade do Porto, i3s & IPATIMUP. Rua Alfredo Allen, 208, 4200-135, Porto, Portugal.
Felipe VillacampaBiomedical Research Institute, Hospital Universitario 12 de Octubre, Avda Córdoba s/n, 28041, Madrid, Spain.
Jesús M ParamioMolecular Oncology Unit, CIEMAT, Avda Complutense 40, 28040, Madrid, Spain. jesusm.paramio@ciemat.es.ORCID http://orcid.org/0000-0001-7520-3177
Mónica Martínez-FernándezMolecular Oncology Unit, CIEMAT, Avda Complutense 40, 28040, Madrid, Spain. monicamartinezfernandez@gmail.com.
Universidad Complutense de Madrid · ESUniversidade do Porto · PTClinica Universidad de Navarra · ESUniversidade de Vigo · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Non-muscle invasive bladder cancer (NMIBC) represents a crucial problem for the national health care systems due to its high rates of recurrence and the consequent need of frequent follow-ups. Here, gene expression analyses in patients diagnosed as NMIBC were performed to determine those molecular pathways involved in tumor initiation, finding that both MYC and E2F are up regulated and helps to tumor initiation and progression. Our results also support an important involvement of alternative splicing events, modifying key pathways to favour bladder tumor evolution. Finally, since MDM2 showed differential exon usage, mutations in TP53 and its protein expression have been also studied in the same patients. Our data support that recurrence is epigenetically mediated and favoured by an increase protein expression of TP53, which appears more frequently mutated in advanced stages and grades, being associated to a worse prognosis. Therefore, TP53 mutational status could be used as a potential biomarker in the first stages of NMIBC to predict recurrence and prognosis.

Indexed as

Alternative SplicingGene Expression Regulation, NeoplasticGenes, p53Carcinoma, Transitional CellDisease-Free SurvivalE2F Transcription FactorsExome SequencingExonsGene OntologyGenes, mycHumansKaplan-Meier EstimateMutation, MissenseNeoplasm InvasivenessNeoplasm ProteinsPapillomaE2F Transcription FactorsMDM2 protein, humanMYC protein, humanNeoplasm ProteinsProto-Oncogene Proteins c-mdm2Proto-Oncogene Proteins c-myc

Identifiers

PMID31316092
PMCPMC6637137
OpenAlexW2956245186

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.