Evidence map›Paper›PMID 31315555›Full record

ArticleBMC genomics2019

Transcriptome profiling of Puccinellia tenuiflora during seed germination under a long-term saline-alkali stress.

Xiaoxue Ye, Hao Wang, Xiuling Cao, Xuejiao Jin, Fuqiang Cui, Yuanyuan Bu, Hua Liu, Wenwu Wu, Tetsuo Takano, Shenkui Liu

Abstract read
In one paragraph

Article in BMC genomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Plants (Basel, Switzerland) · 2026
    Review
  2. Article
  3. Ethylene increases the NaHCOPlant biotechnology journal · 2025
    Article
  4. Article
  5. Adaptive Strategy of the Perennial Halophyte GrassPlants (Basel, Switzerland) · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. The Molecular Mechanism ofPlants (Basel, Switzerland) · 2023
    Article
  12. Transcriptome Analysis of the Salt-TreatedCurrent issues in molecular biology · 2023
    Article
  13. Evaluation of salinity resistance and combining ability analysis in the seedlings of mulberry hybrids (Physiology and molecular biology of plants : an international journal of functional plant biology · 2023
    Article
  14. Turfgrass Salinity Stress and Tolerance-A Review.Plants (Basel, Switzerland) · 2023
    Review
  15. Article
  16. Cellulose andFrontiers in microbiology · 2023
    Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Xiaoxue YeKey Laboratory of Saline-Alkali Vegetation Ecology Restoration in Oil Field (SAVER), Ministry of Education, Alkali Soil Natural Environmental Science Center (ASNESC), Northeast Forestry University, Harbin, 150040, China.
Hao WangKey Laboratory of Saline-Alkali Vegetation Ecology Restoration in Oil Field (SAVER), Ministry of Education, Alkali Soil Natural Environmental Science Center (ASNESC), Northeast Forestry University, Harbin, 150040, China.
Xiuling CaoState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Lin'an, Hangzhou, 311300, China.
Xuejiao JinState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Lin'an, Hangzhou, 311300, China.
Fuqiang CuiState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Lin'an, Hangzhou, 311300, China.
Yuanyuan BuKey Laboratory of Saline-Alkali Vegetation Ecology Restoration in Oil Field (SAVER), Ministry of Education, Alkali Soil Natural Environmental Science Center (ASNESC), Northeast Forestry University, Harbin, 150040, China.
Hua LiuState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Lin'an, Hangzhou, 311300, China.
Wenwu WuState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Lin'an, Hangzhou, 311300, China.
Tetsuo TakanoAsian Natural Environmental Science Center (ANESC), the University of Tokyo, Nishitokyo-shi, Tokyo, 188-0002, Japan.
Shenkui LiuState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Lin'an, Hangzhou, 311300, China. shenkuiliu@nefu.edu.cn.ORCID http://orcid.org/0000-0001-5294-4765

Funding

Changjiang Scholar Program of Chinese Ministry of Education IRT_17R99Special Fund for Forest Scientific Research in the Public Welfare (CN) 201404220The Zhejiang Science and Technology Major Program on Agricultural New Variety Breeding 2016C02056-1
6 · The paper itself

Abstract

backgroundPuccinellia tenuiflora is the most saline-alkali tolerant plant in the Songnen Plain, one of the three largest soda saline-alkali lands worldwide. Here, we investigated the physicochemical properties of saline-alkali soils from the Songnen Plain and sequenced the transcriptomes of germinated P. tenuiflora seedlings under long-term treatment (from seed soaking) with saline-alkali soil extracts.

resultsWe found that the soils from Songnen Plain were reasonably rich in salts and alkali; moreover, the soils were severely deficient in nitrogen [N], phosphorus [P], potassium [K] and several other mineral elements. This finding demonstrated that P. tenuiflora can survive from not only high saline-alkali stress but also a lack of essential mineral elements. To explore the saline-alkali tolerance mechanism, transcriptional analyses of P. tenuiflora plants treated with water extracts from the saline-alkali soils was performed. Interestingly, unigenes involved in the uptake of N, P, K and the micronutrients were found to be significantly upregulated, which indicated the existence of an efficient nutrition-uptake system in P. tenuiflora. Compared with P. tenuiflora, the rice Oryza sativa was hypersensitive to saline-alkali stress. The results obtained using a noninvasive microtest techniques confirmed that the uptake of NO

conclusionsOur results imply that the survival of P. tenuiflora in saline-alkali soils is due to a combination of at least two regulatory mechanisms and the high nutrient uptake capacity of P. tenuiflora plays a pivotal role in its adaptation to those stress. Taken together, our results highlight the role of nutrition uptake in saline-alkali stress tolerance in plants.

Indexed as

Environmental PollutionGerminationSalt ToleranceAdaptation, PhysiologicalAlkaliesGene Expression ProfilingGene Expression Regulation, PlantHydrogen-Ion ConcentrationOryzaPlant RootsPoaceaeSeedsSoilStress, PhysiologicalAlkaliesSoilabiotic stressmineral elementsnoninvasive microtest techniquePuccinellia tenuiflorasaline-alkalitranscriptome

Identifiers

PMID31315555
PMCPMC6637651

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.