Evidence map›Paper›PMID 31312850›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2019

Uncovering homeologous relationships between tetraploid Agropyron cristatum and bread wheat genomes using COS markers.

Mahmoud Said, Alejandro Copete Parada, Eszter Gaál, István Molnár, Adoración Cabrera, Jaroslav Doležel, Jan Vrána

Open access · hybridAbstract read
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Flow karyotyping of wheat-Frontiers in plant science · 2022
    Article
  7. Article
  8. Molecular Cytogenetic Analysis of the Introgression betweenInternational journal of molecular sciences · 2021
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 5 countries.

Mahmoud SaidInstitute of Experimental Botany, Center of the Region Haná for Biotechnological and Agricultural Research, Šlechtitelů 31, 78371, Olomouc, Czech Republic.ORCID http://orcid.org/0000-0002-6169-8655
Alejandro Copete ParadaGenetics Department, ETSIAM, Agrifood Campus of International Excellence (ceiA3), University of Córdoba, 14071, Córdoba, Spain.
Eszter GaálAgricultural Institute, Centre for Agricultural Research, Hungarian Academy of Sciences, Martonvásár, 2462, Hungary.ORCID http://orcid.org/0000-0002-1081-9656
István MolnárInstitute of Experimental Botany, Center of the Region Haná for Biotechnological and Agricultural Research, Šlechtitelů 31, 78371, Olomouc, Czech Republic.ORCID http://orcid.org/0000-0002-7167-9319
Adoración CabreraGenetics Department, ETSIAM, Agrifood Campus of International Excellence (ceiA3), University of Córdoba, 14071, Córdoba, Spain.ORCID http://orcid.org/0000-0002-3612-0245
Jaroslav DoleželInstitute of Experimental Botany, Center of the Region Haná for Biotechnological and Agricultural Research, Šlechtitelů 31, 78371, Olomouc, Czech Republic.ORCID http://orcid.org/0000-0002-6263-0492
Jan VránaInstitute of Experimental Botany, Center of the Region Haná for Biotechnological and Agricultural Research, Šlechtitelů 31, 78371, Olomouc, Czech Republic. vrana@ueb.cas.cz.ORCID http://orcid.org/0000-0001-6171-8516
Centre for Agricultural Research · HUUniversity of Córdoba · ESCentre of the Region Haná for Biotechnical and Agricultural Research · CZCzech Academy of Sciences, Institute of Experimental Botany · CZField Crops Research Institute · VN

Funding

ERDF project Plants as a tool for sustainable global development No. CZ.02.1.01/0.0/0.0/16_019/0000827Grantová Agentura České Republiky 16-16992SH2020 Marie Skłodowska-Curie Actions (AGELWHEAT) H2020-MSCA-IF-2016-746253Ministerio de Economía y Competitividad with co-financing from the European Regional Development Fund AGL2014-52445-RNational Science Foundation OTKA K116277
6 · The paper itself

Abstract

key messageUsing COS markers, the study reveals homeologous relationships between tetraploid Agropyron cristatum and bread wheat to support alien introgression breeding of wheat. Crested wheatgrass (Agropyron cristatum L. Gaertn.) is a wild relative of wheat that possesses many genes that are potentially useful in wheat improvement. The species comprises a complex of diploid, tetraploid and hexaploid forms. In this study, wheat-A. cristatum chromosome, telosome and translocation lines were used to characterize syntenic relationships between tetraploid A. cristatum and bread wheat. Prior to mapping COS markers, the cytogenetic stock lines were characterized for fertility and by FISH and GISH for karyotype stability. Out of 328 COS markers selected for the study, 279 consistently amplified products in tetraploid A. cristatum, and, out of these, 139 were polymorphic between tetraploid crested wheatgrass and wheat. Sixty-nine markers were found to be suitable for the detection of tetraploid A. cristatum chromosomes 1P-6P in wheat, ranging from 6 to 17 markers per chromosome. BLASTn of the source ESTs resulted in significant hits for 67 markers on the wheat pseudomolecules. Generally, COS markers of the same homeologous group were detected on similar arms in both Agropyron and wheat. However, some intragenomic duplications and chromosome rearrangements were detected in tetraploid A. cristatum. These results provide new insights into the structure and evolution of the tetraploid A. cristatum genome and will facilitate the exploitation of the wild species for introgression breeding of bread wheat.

Indexed as

Genetic MarkersHybridization, GeneticTetraploidyAgropyronBreadChromosome MappingChromosomes, PlantGenome, PlantGenotypeTranslocation, GeneticTriticumGenetic Markers

Identifiers

PMID31312850
PMCPMC6763527
OpenAlexW2962101060

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.