Evidence map›Paper›PMID 31311931›Full record

ArticleNature communications2019

Structural basis for the adsorption of a single-stranded RNA bacteriophage.

Ran Meng, Mengqiu Jiang, Zhicheng Cui, Jeng-Yih Chang, Kailu Yang, Joanita Jakana, Xinzhe Yu, Zhao Wang, Bo Hu, Junjie Zhang

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
5.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Suppressing Transfer of Antibiotic Resistance by a Small RNA Virus.bioRxiv : the preprint server for biology · 2026
    Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Extracellular uncoating of bacteriophage MS2.Journal of molecular biology · 2025
    Article
  11. Review
  12. Article
  13. Viral Genome Delivery Across Bacterial Cell Surfaces.Annual review of microbiology · 2024
    Review
  14. Article
  15. Removal ofScience (New York, N.Y.) · 2024
    Article
  16. Article
  17. Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Ran MengDepartment of Biochemistry and Biophysics, Center for Phage Technology, Texas A&M University, College Station, TX, 77843, USA.ORCID http://orcid.org/0000-0003-1271-3975
Mengqiu JiangDepartment of Biochemistry and Biophysics, Center for Phage Technology, Texas A&M University, College Station, TX, 77843, USA.
Zhicheng CuiDepartment of Biochemistry and Biophysics, Center for Phage Technology, Texas A&M University, College Station, TX, 77843, USA.
Jeng-Yih ChangDepartment of Biochemistry and Biophysics, Center for Phage Technology, Texas A&M University, College Station, TX, 77843, USA.
Kailu YangDepartment of Biochemistry and Biophysics, Center for Phage Technology, Texas A&M University, College Station, TX, 77843, USA.
Joanita JakanaNational Center for Macromolecular Imaging, Verna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX, 77030, USA.
Xinzhe YuNational Center for Macromolecular Imaging, Verna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX, 77030, USA.
Zhao WangNational Center for Macromolecular Imaging, Verna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX, 77030, USA.ORCID http://orcid.org/0000-0003-4897-9986
Bo HuDepartment of Microbiology and Molecular Genetics, The University of Texas Health Science Center at Houston, Houston, TX, 77030, USA. Bo.Hu@uth.tmc.edu.
Junjie ZhangDepartment of Biochemistry and Biophysics, Center for Phage Technology, Texas A&M University, College Station, TX, 77843, USA. junjiez@tamu.edu.
Texas A&M University · USBaylor College of Medicine · USHoward Hughes Medical Institute · USThe University of Texas Health Science Center at Houston · US

Funding

Vulnerabilities in Mycobacterial Cell-Wall BiogenesisP01AI095208 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI ZHANG, JUNJIE · 2012 to 2022
$19.8M
3 D ELECTRON MICROSCOPY OF MACROMOLECULES (5P41RR002250-27)P41GM103832 · NIGMS · STANFORD UNIVERSITY · PI CHIU, WAH · 2012 to 2019
$15.1M
CryoEM Data Collection Facility Consortium at NCMIU24GM116787 · NIGMS · STANFORD UNIVERSITY · PI BULLITT, ESTHER, CHIU, WAH · 2016 to 2020
$3.1M
Characterize essential regions in C. difficile toxin B for its neutralizationR21AI137696 · NIAID · TEXAS A&M AGRILIFE RESEARCH · PI ZHANG, JUNJIE · 2018 to 2019
$390k
NIAID NIH HHS P01 AI095208NIAID NIH HHS R21 AI137696NIGMS NIH HHS P41 GM103832NIGMS NIH HHS U24 GM116787
6 · The paper itself

Abstract

Single-stranded RNA bacteriophages (ssRNA phages) infect Gram-negative bacteria via a single maturation protein (Mat), which attaches to a retractile pilus of the host. Here we present structures of the ssRNA phage MS2 in complex with the Escherichia coli F-pilus, showing a network of hydrophobic and electrostatic interactions at the Mat-pilus interface. Moreover, binding of the pilus induces slight orientational variations of the Mat relative to the rest of the phage capsid, priming the Mat-connected genomic RNA (gRNA) for its release from the virions. The exposed tip of the attached Mat points opposite to the direction of the pilus retraction, which may facilitate the translocation of the gRNA from the capsid into the host cytosol. In addition, our structures determine the orientation of the assembled F-pilin subunits relative to the cell envelope, providing insights into the F-like type IV secretion systems.

Indexed as

Cell WallCryoelectron MicroscopyEscherichia coliEscherichia coli ProteinsFimbriae, BacterialFimbriae ProteinsLevivirusRNA, ViralViral ProteinsEscherichia coli ProteinsFimbriae ProteinsF pilin, E colimaturation protein, Enterobacterio phage MS2RNA, ViralViral Proteins

Identifiers

PMID31311931
PMCPMC6635492
OpenAlexW2960833737

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.