Evidence map›Paper›PMID 31311886›Full record

ArticlemBio2019

Causes and Effects of Loss of Classical Nonhomologous End Joining Pathway in Parasitic Eukaryotes.

Anna Nenarokova, Kristína Záhonová, Marija Krasilnikova, Ondřej Gahura, Richard McCulloch, Alena Zíková, Vyacheslav Yurchenko, Julius Lukeš

Abstract read
In one paragraph

Article in mBio, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. How Structural Variations Influence Crop Improvement.International journal of molecular sciences · 2025
    Review
  6. Article
  7. Article
  8. A limitation lifted: A conditional knockdown system reveals essential roles for Polo-like kinase and Aurora kinase 1 inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  9. Article
  10. Article
  11. Article
  12. Massive invasion of organellar DNA drives nuclear genome evolution inProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Integration of DNA Repair, Antigenic Variation, Cytoadhesion, and Chance inFrontiers in cellular and infection microbiology · 2022
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Anna NenarokovaInstitute of Parasitology, Biology Centre, Czech Academy of Sciences, České Budějovice, Czech Republic.ORCID 0000-0003-1441-037X
Kristína ZáhonováInstitute of Parasitology, Biology Centre, Czech Academy of Sciences, České Budějovice, Czech Republic.ORCID 0000-0002-5766-0267
Marija KrasilnikovaWellcome Centre for Molecular Parasitology, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, Scotland.
Ondřej GahuraInstitute of Parasitology, Biology Centre, Czech Academy of Sciences, České Budějovice, Czech Republic.
Richard McCullochWellcome Centre for Molecular Parasitology, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, Scotland.
Alena ZíkováInstitute of Parasitology, Biology Centre, Czech Academy of Sciences, České Budějovice, Czech Republic.
Vyacheslav YurchenkoMartsinovsky Institute of Medical Parasitology, Sechenov University, Moscow, Russia.
Julius LukešInstitute of Parasitology, Biology Centre, Czech Academy of Sciences, České Budějovice, Czech Republic jula@paru.cas.cz.ORCID 0000-0002-0578-6618

Funding

Biotechnology and Biological Sciences Research Council BB/K006495/1Biotechnology and Biological Sciences Research Council BB/M028909/1Biotechnology and Biological Sciences Research Council BB/N016165/1Wellcome Trust 104111Wellcome Trust 206815/Z/17/Z
6 · The paper itself

Abstract

We report frequent losses of components of the classical nonhomologous end joining pathway (C-NHEJ), one of the main eukaryotic tools for end joining repair of DNA double-strand breaks, in several lineages of parasitic protists. Moreover, we have identified a single lineage among trypanosomatid flagellates that has lost Ku70 and Ku80, the core C-NHEJ components, and accumulated numerous insertions in many protein-coding genes. We propose a correlation between these two phenomena and discuss the possible impact of the C-NHEJ loss on genome evolution and transition to the parasitic lifestyle.

Indexed as

DNA End-Joining RepairAmino Acid SequenceAnimalsEukaryotaGenomeGenomicsKu AutoantigenModels, MolecularParasitesPhylogenyProtein ConformationSignal TransductionKu AutoantigenDNA repairgenome sizeparasite

Identifiers

PMID31311886
PMCPMC6635534

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.