Evidence map›Paper›PMID 31311578›Full record

ArticleBMC research notes2019

Plasmid profiling and incompatibility grouping of multidrug resistant Salmonella enterica serovar Typhi isolates in Nairobi, Kenya.

Winnie C Mutai, Peter G Waiyaki, Samuel Kariuki, Anne W T Muigai

Open access · goldAbstract read
In one paragraph

Article in BMC research notes, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Epidemiology of Plasmids inAntibiotics (Basel, Switzerland) · 2022
    Article
  5. Plasmid profile analysis ofEpidemiology and infection · 2022
    Article
  6. Article
  7. Review
  8. Predicting plasmid persistence in microbial communities by coarse-grained modeling.BioEssays : news and reviews in molecular, cellular and developmental biology · 2021
    Article
  9. Prevalence of IncFIB Plasmids Found amongPathogens (Basel, Switzerland) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Winnie C MutaiDepartment of Medical Microbiology, School of Medicine, University of Nairobi, Nairobi, Kenya. winny@uonbi.ac.ke.ORCID http://orcid.org/0000-0003-0612-9430
Peter G WaiyakiCentre for Microbiology Research, Kenya Medical Research Institute, Nairobi, Kenya.
Samuel KariukiCentre for Microbiology Research, Kenya Medical Research Institute, Nairobi, Kenya.
Anne W T MuigaiSchool of Biological Sciences, Jomo Kenyatta University of Agriculture and Technology, Juja, Kenya.
Kenya Medical Research Institute · KEJomo Kenyatta University of Agriculture and Technology · KEUniversity of Nairobi · KE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesPlasmids harbour antibiotic resistance genes which contribute to the emergence of multidrug resistant pathogens. We detected the presence of plasmids in multidrug resistant Salmonella enterica serovar Typhi (S. Typhi) isolates from our previous study and consequently determined their incompatibility groups and possibility of conjugation transmission. Plasmids were extracted from 98 multidrug resistant S. Typhi isolates based on alkaline lysis technique. Plasmid incompatibility grouping was established by PCR replicon typing using 18 pairs of primers to amplify FIA, FIB, FIC, HI1, HI2, I1-Iγ, L/M, N, P, W, T, A/C, K, B/O, X, Y, F and FIIA replicons. Antibiotic resistance phenotypes were conjugally transferred from S. Typhi isolates with plasmids to Escherichia coli K12F strain devoid of plasmids.

resultsApproximately 79.6% of the MDR S. Typhi isolates were related to the existence of plasmids. We detected 93.6% of plasmids belonging to incompatibility (Inc) group HI1. The other incompatibility groups identified included IncFIC (16.7%), IncP (1.3%), and IncI1 (1.3%) which appeared together with Inc HI1. MDR S. Typhi isolated carried a homologous plasmid of incompatibility group HI1 most of which transferred the resistance phenotypes of ampicillin, tetracycline and chloramphenicol to the transconjugants.

Indexed as

AmpicillinAnti-Bacterial AgentsChloramphenicolConjugation, GeneticDrug Resistance, Multiple, BacterialEscherichia coliHumansKenyaMicrobial Sensitivity TestsPlasmidsRepliconSalmonella typhiTetracyclineTyphoid FeverAmpicillinAnti-Bacterial AgentsChloramphenicolTetracyclineConjugationMultidrug resistant S. TyphiPlasmid incompatibility grouping

Identifiers

PMID31311578
PMCPMC6636098
OpenAlexW2961070213

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.