Evidence map›Paper›PMID 31309006›Full record

ArticlePeerJ2019

A survey of the sperm whale (

Chang Li, Xiaoxuan Tan, Jie Bai, Qiwu Xu, Shanshan Liu, Wenjie Guo, Cong Yu, Guangyi Fan, Yishan Lu, He Zhang and 3 more

Open access · goldAbstract read
In one paragraph

Article in PeerJ, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Chang Li *BGI Education Center, University of Chinese Academy of Sciences, Shenzhen, China.
Xiaoxuan Tan *BGI-Qingdao, BGI-Shenzhen, Qingdao, China.
Jie BaiBGI-Qingdao, BGI-Shenzhen, Qingdao, China.
Qiwu XuBGI-Qingdao, BGI-Shenzhen, Qingdao, China.
Shanshan LiuBGI-Qingdao, BGI-Shenzhen, Qingdao, China.
Wenjie GuoBGI-Qingdao, BGI-Shenzhen, Qingdao, China.
Cong YuBGI-Qingdao, BGI-Shenzhen, Qingdao, China.
Guangyi FanBGI-Qingdao, BGI-Shenzhen, Qingdao, China.
Yishan LuGuangdong Ocean University, Shenzhen, China.
He ZhangBGI-Qingdao, BGI-Shenzhen, Qingdao, China.
Huanming YangBGI Education Center, University of Chinese Academy of Sciences, Shenzhen, China.
Jianwei ChenBGI-Qingdao, BGI-Shenzhen, Qingdao, China.
Xin LiuBGI-Qingdao, BGI-Shenzhen, Qingdao, China.
University of Chinese Academy of Sciences · CNBGI Group (China) · CNChina National GeneBank · CNGuangdong Ocean University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMammalian commensal microbiota play important roles in the health of its host. In comparison to terrestrial mammals, commensal microbiota of marine mammals is mainly focused on the composition and function of skin and gut microbiota, with less attention paid to the health impact of bacteria and viruses. Previous studies on sperm whales (

methodsHere, we sequenced the metagenomes of blood, muscle and fecal samples from a stranded sperm whale using the BGISEQ-500 platform. We compared the diversity and abundance of microbiomes from three different tissues and tried to search pathogenic bacterial and virulence genes probably related to the health of the sperm whale. We also performed 16S rDNA sequencing of the fecal sample to compare to published gut metagenome data from other marine mammals.

resultsOur results demonstrated notable differences in species richness and abundance in the three samples. Extensive bacteria, including

Indexed as

Commensal microbiomePathogentic microorganismsSperm whale

Identifiers

PMID31309006
PMCPMC6612419
OpenAlexW2953597055

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.