Evidence map›Paper›PMID 31308541›Full record

ArticleNature immunology2019

Altered differentiation is central to HIV-specific CD4

Antigoni Morou, Elsa Brunet-Ratnasingham, Mathieu Dubé, Roxanne Charlebois, Eloi Mercier, Sam Darko, Nathalie Brassard, Krystelle Nganou-Makamdop, Sahaana Arumugam, Gabrielle Gendron-Lepage and 13 more

Abstract read
In one paragraph

Article in Nature immunology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed, 2 pooled it
8.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed, 2 syntheses or guidelines pooled it, 108 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. HIV controllers: hope for a functional cure.Frontiers in immunology · 2025
    Review
  10. IL-27 effects on HIVFrontiers in virology (Lausanne, Switzerland) · 2025
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. The commoneLife · 2024
    Article
  16. The commonbioRxiv : the preprint server for biology · 2024
    Article
  17. T-cell receptor sequencing reveals selected donor-reactive CD8American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons · 2024
    Article
  18. Article
  19. Metformin Enhances Antibody-Mediated Recognition of HIV-Infected CD4bioRxiv : the preprint server for biology · 2024
    Article
  20. Article

9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 6 institutions in 2 countries.

Antigoni MorouResearch Centre of the Centre Hospitalier de l'Université de Montréal, Montreal, Quebec, Canada.
Elsa Brunet-RatnasinghamResearch Centre of the Centre Hospitalier de l'Université de Montréal, Montreal, Quebec, Canada.
Mathieu DubéResearch Centre of the Centre Hospitalier de l'Université de Montréal, Montreal, Quebec, Canada.
Roxanne CharleboisResearch Centre of the Centre Hospitalier de l'Université de Montréal, Montreal, Quebec, Canada.
Eloi MercierCanadian Centre for Computational Genomics-Montréal Node, Montreal, Quebec, Canada.
Sam DarkoHuman Immunology Section, Vaccine Research Center, NIAID, NIH, Bethesda, MD, USA.
Nathalie BrassardResearch Centre of the Centre Hospitalier de l'Université de Montréal, Montreal, Quebec, Canada.ORCID http://orcid.org/0000-0002-4320-9416
Krystelle Nganou-MakamdopHuman Immunology Section, Vaccine Research Center, NIAID, NIH, Bethesda, MD, USA.
Sahaana ArumugamHuman Immunology Section, Vaccine Research Center, NIAID, NIH, Bethesda, MD, USA.
Gabrielle Gendron-LepageResearch Centre of the Centre Hospitalier de l'Université de Montréal, Montreal, Quebec, Canada.
Lifei YangDepartment of Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA, USA.
Julia NiesslResearch Centre of the Centre Hospitalier de l'Université de Montréal, Montreal, Quebec, Canada.ORCID http://orcid.org/0000-0001-8852-1924
Amy E BaxterResearch Centre of the Centre Hospitalier de l'Université de Montréal, Montreal, Quebec, Canada.
James M BillingsleyYerkes National Primate Research Center and Emory University, Atlanta, GA, USA.
Premeela A RajakumarYerkes National Primate Research Center and Emory University, Atlanta, GA, USA.
François LefebvreCanadian Centre for Computational Genomics-Montréal Node, Montreal, Quebec, Canada.
R Paul JohnsonYerkes National Primate Research Center and Emory University, Atlanta, GA, USA.
Cécile TremblayResearch Centre of the Centre Hospitalier de l'Université de Montréal, Montreal, Quebec, Canada.
Jean-Pierre RoutyChronic Viral Illnesses Service and Division of Hematology, McGill University Health Centre, Montreal, Quebec, Canada.
Richard T WyattCenter for HIV/AIDS Vaccine Immunology and Immunogen Discovery, La Jolla, CA, USA.
Andrés FinziResearch Centre of the Centre Hospitalier de l'Université de Montréal, Montreal, Quebec, Canada.
Daniel C DouekHuman Immunology Section, Vaccine Research Center, NIAID, NIH, Bethesda, MD, USA.
Daniel E KaufmannResearch Centre of the Centre Hospitalier de l'Université de Montréal, Montreal, Quebec, Canada. daniel.kaufmann@umontreal.ca.ORCID http://orcid.org/0000-0003-4467-136X
Centre Hospitalier de l’Université de Montréal · CAInternational AIDS Vaccine Initiative · USEmory University · USOntario Genomics · CAScripps Research Institute · USMcGill University Health Centre · CA

Funding

Yerkes National Primate Research Center Role of type-I IFN in regulating COVID-19 induced inflammation and pathogenesisP51OD011132 · OD · EMORY UNIVERSITY · PI Joon Sup Lee · 2012 to 2026
$167.0M
Support Component D/Vaccine Discovery, Concept to ClinicUM1AI100663 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI AHMED, RAFI · 2012 to 2018
$131.5M
New England Primate Research Center Base GrantP51OD011103 · OD · HARVARD MEDICAL SCHOOL · PI FLIER, JEFFREY S · 2012 to 2013
$24.7M
The Genome Analysis CoreZICAI005133 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI DOUEK, DANIEL CESAR · 2019 to 2025
$16.9M
InflammationZIAAI005031 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI DOUEK, DANIEL CESAR · 2009 to 2024
$5.9M
Immunoregulatory networks and HIV pathogenesisR01HL092565 · NHLBI · MASSACHUSETTS GENERAL HOSPITAL · PI KAUFMANN, DANIEL E · 2007 to 2015
$3.4M
NHLBI NIH HHS R01 HL092565NIAID NIH HHS UM1 AI100663NIH HHS P51 OD011103NIH HHS P51 OD011132
6 · The paper itself

Abstract

Dysfunction of virus-specific CD4

Indexed as

Anti-HIV AgentsGene ExpressionGene Expression ProfilingHIV InfectionsHumansReceptors, CXCR5Th17 CellsTh1 CellsViral LoadVirus ReplicationAnti-HIV AgentsCXCR5 protein, humanReceptors, CXCR5

Identifiers

PMID31308541
PMCPMC6642691
OpenAlexW2961959532

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.