Evidence map›Paper›PMID 31308504›Full record

ArticleNature plants2019

Musa balbisiana genome reveals subgenome evolution and functional divergence.

Zhuo Wang, Hongxia Miao, Juhua Liu, Biyu Xu, Xiaoming Yao, Chunyan Xu, Shancen Zhao, Xiaodong Fang, Caihong Jia, Jingyi Wang and 31 more

Open access · hybridAbstract read
In one paragraph

Article in Nature plants, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 106 papers.

0numbers the graph read from it
0cells of the map it votes in
106citing papers in PubMed
42.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

106 citing papers in PubMed, 220 citations in OpenAlex.

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  13. Banana breeding by genome design.Journal of integrative plant biology · 2025
    Review
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  19. Article
  20. Article

46 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

41 authors at 6 institutions in 3 countries.

Zhuo WangKey Laboratory of Biology and Genetic Resources of Tropical Crops, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, China.
Hongxia MiaoKey Laboratory of Biology and Genetic Resources of Tropical Crops, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, China.
Juhua LiuKey Laboratory of Biology and Genetic Resources of Tropical Crops, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, China.
Biyu XuKey Laboratory of Biology and Genetic Resources of Tropical Crops, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, China.
Xiaoming YaoBGI Genomics, BGI-Shenzhen, Shenzhen, China.
Chunyan XuBGI Genomics, BGI-Shenzhen, Shenzhen, China.
Shancen ZhaoBGI Institute of Applied Agriculture, BGI-Shenzhen, Shenzhen, China.
Xiaodong FangBGI Genomics, BGI-Shenzhen, Shenzhen, China.
Caihong JiaKey Laboratory of Biology and Genetic Resources of Tropical Crops, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, China.
Jingyi WangKey Laboratory of Biology and Genetic Resources of Tropical Crops, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, China.
Jianbin ZhangKey Laboratory of Biology and Genetic Resources of Tropical Crops, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, China.
Jingyang LiKey Laboratory of Genetic Improvement of Bananas, Hainan province, Haikou Experimental Station, China Academy of Tropical Agricultural Sciences, Haikou, China.
Yi XuKey Laboratory of Genetic Improvement of Bananas, Hainan province, Haikou Experimental Station, China Academy of Tropical Agricultural Sciences, Haikou, China.
Jiashui WangKey Laboratory of Genetic Improvement of Bananas, Hainan province, Haikou Experimental Station, China Academy of Tropical Agricultural Sciences, Haikou, China.
Weihong MaKey Laboratory of Genetic Improvement of Bananas, Hainan province, Haikou Experimental Station, China Academy of Tropical Agricultural Sciences, Haikou, China.
Zhangyan WuBGI Genomics, BGI-Shenzhen, Shenzhen, China.
Lili YuBGI Genomics, BGI-Shenzhen, Shenzhen, China.
Yulan YangBGI Genomics, BGI-Shenzhen, Shenzhen, China.
Chun LiuBGI Genomics, BGI-Shenzhen, Shenzhen, China.
Yu GuoBGI Genomics, BGI-Shenzhen, Shenzhen, China.
Silong SunBGI Genomics, BGI-Shenzhen, Shenzhen, China.
Franc-Christophe BaurensCIRAD, UMR AGAP, Montpellier, France.
Guillaume MartinCIRAD, UMR AGAP, Montpellier, France.ORCID http://orcid.org/0000-0002-1801-7500
Frederic SalmonAGAP, Univ Montpellier, CIRAD, INRA, Montpellier SupAgro, Montpellier, France.
Olivier GarsmeurCIRAD, UMR AGAP, Montpellier, France.
Nabila YahiaouiCIRAD, UMR AGAP, Montpellier, France.
Catherine HervouetCIRAD, UMR AGAP, Montpellier, France.
Mathieu RouardBioversity International, Montpellier, France.ORCID http://orcid.org/0000-0003-0284-1885
Nathalie LaboureauCIRAD, UMR BGPI, Montpellier, France.
Remy HabasCIRAD, UMR BGPI, Montpellier, France.
Sebastien RicciAGAP, Univ Montpellier, CIRAD, INRA, Montpellier SupAgro, Montpellier, France.
Ming PengKey Laboratory of Biology and Genetic Resources of Tropical Crops, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, China.
Anping GuoKey Laboratory of Biology and Genetic Resources of Tropical Crops, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, China.
Jianghui XieKey Laboratory of Biology and Genetic Resources of Tropical Crops, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, China.
Yin LiWaksman Institute of Microbiology, Rutgers, The State University of New Jersey, Piscataway, NJ, USA.ORCID http://orcid.org/0000-0002-5454-4201
Zehong DingKey Laboratory of Biology and Genetic Resources of Tropical Crops, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, China.
Yan YanKey Laboratory of Biology and Genetic Resources of Tropical Crops, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, China.
Weiwei TieKey Laboratory of Biology and Genetic Resources of Tropical Crops, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, China.
Angélique D'HontCIRAD, UMR AGAP, Montpellier, France. dhont@cirad.fr.ORCID http://orcid.org/0000-0002-5318-921X
Wei HuKey Laboratory of Biology and Genetic Resources of Tropical Crops, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, China. huwei2010916@126.com.ORCID http://orcid.org/0000-0002-6796-8046
Zhiqiang JinKey Laboratory of Biology and Genetic Resources of Tropical Crops, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, China. 18689846976@163.com.ORCID http://orcid.org/0000-0003-2939-1028
Chinese Academy of Tropical Agricultural Sciences · CNBGI Group (China) · CNCentre de Coopération Internationale en Recherche Agronomique pour le Développement · FRHaikou Experimental Station · CNInstitut Agro Montpellier · FRRutgers, The State University of New Jersey · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Banana cultivars (Musa ssp.) are diploid, triploid and tetraploid hybrids derived from Musa acuminata and Musa balbisiana. We presented a high-quality draft genome assembly of M. balbisiana with 430 Mb (87%) assembled into 11 chromosomes. We identified that the recent divergence of M. acuminata (A-genome) and M. balbisiana (B-genome) occurred after lineage-specific whole-genome duplication, and that the B-genome may be more sensitive to the fractionation process compared to the A-genome. Homoeologous exchanges occurred frequently between A- and B-subgenomes in allopolyploids. Genomic variation within progenitors resulted in functional divergence of subgenomes. Global homoeologue expression dominance occurred between subgenomes of the allotriploid. Gene families related to ethylene biosynthesis and starch metabolism exhibited significant expansion at the pathway level and wide homoeologue expression dominance in the B-subgenome of the allotriploid. The independent origin of 1-aminocyclopropane-1-carboxylic acid oxidase (ACO) homoeologue gene pairs and tandem duplication-driven expansion of ACO genes in the B-subgenome contributed to rapid and major ethylene production post-harvest in allotriploid banana fruits. The findings of this study provide greater context for understanding fruit biology, and aid the development of tools for breeding optimal banana cultivars.

Indexed as

Evolution, MolecularGenome, PlantEthylenesGenetic VariationMolecular Sequence AnnotationMusaethyleneEthylenes

Identifiers

PMID31308504
PMCPMC6784884
OpenAlexW2957549735

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