Evidence map›Paper›PMID 31308439›Full record

ArticleScientific reports2019

Identification and validation of SNP markers linked to seed toxicity in Jatropha curcas L.

Daniele Trebbi, Samathmika Ravi, Chiara Broccanello, Claudia Chiodi, George Francis, John Oliver, Sujatha Mulpuri, Subhashini Srinivasan, Piergiorgio Stevanato

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Daniele TrebbiSyngenta Seeds Inc., California, USA.
Samathmika RaviDAFNAE, Università degli Studi di Padova, Legnaro, Italy.
Chiara BroccanelloDAFNAE, Università degli Studi di Padova, Legnaro, Italy.
Claudia ChiodiDAFNAE, Università degli Studi di Padova, Legnaro, Italy.
George FrancisJATROPOWER AG, Baar, Switzerland.
John OliverJATROPOWER AG, Baar, Switzerland.
Sujatha MulpuriICAR, Indian Institute of Oilseeds Research, Hyderabad, India.
Subhashini SrinivasanIBAB, Institute of Bioinformatics and Applied Biotechnology, Bangalore, India.
Piergiorgio StevanatoDAFNAE, Università degli Studi di Padova, Legnaro, Italy. stevanato@unipd.it.
University of Padua · ITIndian Institute of Oilseeds Research · INInstitute of Bioinformatics and Applied Biotechnology · INSyngenta (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Edible/non-toxic varieties of Jatropha curcas L. are gaining increasing attention, providing both oil as biofuel feedstock or even as edible oil and the seed kernel meal as animal feed ingredient. They are a viable alternative to the limitation posed by the presence of phorbol esters in toxic varieties. Accurate genotyping of toxic/non-toxic accessions is critical to breeding management. The aim of this study was to identify SNP markers linked to seed toxicity in J. curcas. For SNP discovery, NGS technology was used to sequence the whole genomes of a toxic and non-toxic parent along with a bulk of 51 toxic and 30 non-toxic F

Indexed as

BiofuelsBiomarkersGenetic LinkageGenotypeJatrophaPlant OilsPolymorphism, Single NucleotideSeedsBiofuelsBiomarkersPlant Oils

Identifiers

PMID31308439
PMCPMC6629616
OpenAlexW2959045680

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.