Evidence map›Paper›PMID 31308437›Full record

ArticleScientific reports2019

The transcriptome of potato tuber phellogen reveals cellular functions of cork cambium and genes involved in periderm formation and maturation.

Vijaya K R Vulavala, Edna Fogelman, Adi Faigenboim, Oded Shoseyov, Idit Ginzberg

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
8.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. International journal of molecular sciences · 2022
    Article
  13. Cork Development: What Lies Within.Plants (Basel, Switzerland) · 2022
    Review
  14. The genetic architectures of vine and skin maturity in tetraploid potato.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  15. Potato Periderm Development and Tuber Skin Quality.Plants (Basel, Switzerland) · 2022
    Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Vijaya K R VulavalaInstitute of Plant Sciences, Agricultural Research Organization, the Volcani Center, 68 HaMaccabim Road, P. O. Box 15159, Rishon LeZion, 7505101, Israel.
Edna FogelmanInstitute of Plant Sciences, Agricultural Research Organization, the Volcani Center, 68 HaMaccabim Road, P. O. Box 15159, Rishon LeZion, 7505101, Israel.
Adi FaigenboimInstitute of Plant Sciences, Agricultural Research Organization, the Volcani Center, 68 HaMaccabim Road, P. O. Box 15159, Rishon LeZion, 7505101, Israel.
Oded ShoseyovThe Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, Faculty of Agriculture, Hebrew University of Jerusalem, Rehovot, 7610001, Israel.
Idit GinzbergInstitute of Plant Sciences, Agricultural Research Organization, the Volcani Center, 68 HaMaccabim Road, P. O. Box 15159, Rishon LeZion, 7505101, Israel. iditgin@volcani.agri.gov.il.ORCID http://orcid.org/0000-0002-3091-9179
Agricultural Research Organization · ILHebrew University of Jerusalem · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The periderm is a protective corky tissue that is formed through the cambial activity of phellogen cells, when the outer epidermis is damaged. Timely periderm formation is critical to prevent pathogen invasion and water loss. The outer layers of the potato periderm, the tuber skin, serves as a model to study cork development. Early in tuber development the phellogen becomes active and produces the skin. During tuber maturation it becomes inactive and the skin adheres to the tuber flesh. The characterization of potato phellogen may contribute to the management of costly agricultural problems related to incomplete skin-set and the resulting skinning injuries, and provide us with new knowledge regarding cork development in planta. A transcriptome of potato tuber phellogen isolated by laser capture microdissection indicated similarity to vascular cambium and the cork from trees. Highly expressed genes and transcription factors indicated that phellogen activation involves cytokinesis and gene reprograming for the establishment of a dedifferentiation state; whereas inactivation is characterized by activity of genes that direct organ identity in meristem and cell-wall modifications. The expression of selected genes was analyzed using qPCR in native and wound periderm at distinct developmental stages. This allowed the identification of genes involved in periderm formation and maturation.

Indexed as

CambiumGene Expression Regulation, PlantMeristemPlant ProteinsPlant TubersSolanum tuberosumTranscriptomePlant Proteins

Identifiers

PMID31308437
PMCPMC6629697
OpenAlexW2957596846

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.