Evidence map›Paper›PMID 31306516›Full record

ArticleProtein science : a publication of the Protein Society2019

The cysteine-free single mutant C32S of APEX2 is a highly expressed and active fusion tag for proximity labeling applications.

Meng-Sen Huang, Wen-Ching Lin, Jen-Hsuan Chang, Cheng-Hung Cheng, Han Ying Wang, Kurt Yun Mou

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Proximity Labeling in Plants.Annual review of plant biology · 2023
    Review
  5. Proximity Protein Labeling InJournal of biological methods · 2023
    Article
  6. Article
  7. Article
  8. Review
  9. Proximity-dependent labeling methods for proteomic profiling in living cells: An update.Wiley interdisciplinary reviews. Developmental biology · 2021
    Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Meng-Sen HuangInstitute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan.
Wen-Ching LinInstitute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan.
Jen-Hsuan ChangInstitute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan.
Cheng-Hung ChengInstitute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan.
Han Ying WangInstitute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan.
Kurt Yun MouInstitute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan.ORCID 0000-0001-5423-9031
Institute of Biomedical Sciences, Academia Sinica · TWNational Taiwan University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

APEX2, an engineered ascorbate peroxidase for high activity, is a powerful tool for proximity labeling applications. Owing to its lack of disulfides and the calcium-independent activity, APEX2 can be applied intracellularly for targeted electron microscopy imaging or interactome mapping when fusing to a protein of interest. However, APEX2 fusion is often deleterious to the protein expression, which seriously hampers its wide utility. This problem is especially compelling when APEX2 is fused to structurally delicate proteins, such as multi-pass membrane proteins. In this study, we found that a cysteine-free single mutant C32S of APEX2 dramatically improved the expression of fusion proteins in mammalian cells without compromising the enzyme activity. We fused APEX2 and APEX2

Indexed as

MutationCell MembraneCysteineDNA-(Apurinic or Apyrimidinic Site) LyaseEndonucleasesGene ExpressionHEK293 CellsHumansMultifunctional EnzymesProtein EngineeringRecombinant Fusion ProteinsSolute Carrier ProteinsAPEX2 protein, humanCysteineDNA-(Apurinic or Apyrimidinic Site) LyaseEndonucleasesMultifunctional EnzymesRecombinant Fusion ProteinsSolute Carrier ProteinsAPEX2ascorbate peroxidaseproximity labelingsolute carriers

Identifiers

PMID31306516
PMCPMC6699085
OpenAlexW2956370786

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.