Evidence map›Paper›PMID 31306434›Full record

ArticlePloS one2019

Image processing for AFB segmentation in bacilloscopies of pulmonary tuberculosis diagnosis.

Jorge Luis Díaz-Huerta, Adriana Del Carmen Téllez-Anguiano, Miguelangel Fraga-Aguilar, José Antonio Gutiérrez-Gnecchi, Sergio Arellano-Calderón

Abstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jorge Luis Díaz-HuertaDepartamento de Estudios de Posgrado en Ingeniería, Tecnológico Nacional de México / Instituto Tecnológico de Morelia, Morelia, Michoacán, México.
Adriana Del Carmen Téllez-AnguianoDepartamento de Estudios de Posgrado en Ingeniería, Tecnológico Nacional de México / Instituto Tecnológico de Morelia, Morelia, Michoacán, México.ORCID 0000-0002-0945-2076
Miguelangel Fraga-AguilarDepartamento de Estudios de Posgrado en Ingeniería, Tecnológico Nacional de México / Instituto Tecnológico de Morelia, Morelia, Michoacán, México.
José Antonio Gutiérrez-GnecchiDepartamento de Estudios de Posgrado en Ingeniería, Tecnológico Nacional de México / Instituto Tecnológico de Morelia, Morelia, Michoacán, México.
Sergio Arellano-CalderónLaboratorio Estatal de Salud Pública, Morelia, Michoacán, México.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Image segmentation applied to medical image analysis is still a critical and important task. Although there exist several segmentation algorithms that have been widely studied in literature, these are subject to segmentation problems such as over- and under-segmentation as well as non-closed edges. In this paper, a simple method that combines well-known segmentation algorithms is presented. This method is applied to detect acid-fast bacilli (AFB) in bacilloscopies used to diagnose pulmonary tuberculosis (TB). This diagnosis can be performed through different tests, and the most used worldwide is smear microscopy because of its low cost and effectiveness. This diagnosis technique is based on the analysis and counting of the bacilli in the bacilloscopy observed under an optical microscope. The proposed method is used to segment the bacilli in digital images from bacilloscopies processed using Ziehl-Neelsen (ZN) staining. The proposed method is fast, has a low computational cost and good efficiency compared to other methods. The bacilli image segmentation is performed by image processing and analysis techniques, probability concepts and classifiers. In this work, a Bayesian classifier based on a Gaussian mixture model (GMM) is used. The segmentations' results are validated by using the Jaccard index, which indicates the efficiency of the classifier.

Indexed as

Diagnostic Tests, RoutineAlgorithmsBayes TheoremCell PhoneHumansImage Processing, Computer-AssistedMicroscopyMycobacterium tuberculosisSpecimen HandlingSputumTuberculosis, Pulmonary

Identifiers

PMID31306434
PMCPMC6629065

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.