Evidence map›Paper›PMID 31306018›Full record

ArticleThe journal of physical chemistry letters2019

Role of Coiled-Coil Registry Shifts in the Activation of Human Bicaudal D2 for Dynein Recruitment upon Cargo Binding.

Crystal R Noell, Jia Ying Loh, Erik W Debler, Kyle M Loftus, Heying Cui, Blaine B Russ, Kaiqi Zhang, Puja Goyal, Sozanne R Solmaz

Open access · greenAbstract read
In one paragraph

Article in The journal of physical chemistry letters, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 26 citations in OpenAlex.

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  5. Tuning the stator subunit of the flagellar motor with coiled-coil engineering.Protein science : a publication of the Protein Society · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Crystal R NoellDepartment of Chemistry , State University of New York at Binghamton , P.O. Box 6000, Binghamton , New York 13902 , United States.
Jia Ying LohDepartment of Chemistry , State University of New York at Binghamton , P.O. Box 6000, Binghamton , New York 13902 , United States.
Erik W DeblerDepartment of Biochemistry & Molecular Biology , Thomas Jefferson University , 1020 Locust Street , Philadelphia , Pennsylvania 19107 , United States.ORCID http://orcid.org/0000-0002-2587-2150
Kyle M LoftusDepartment of Chemistry , State University of New York at Binghamton , P.O. Box 6000, Binghamton , New York 13902 , United States.
Heying CuiDepartment of Chemistry , State University of New York at Binghamton , P.O. Box 6000, Binghamton , New York 13902 , United States.
Blaine B RussDepartment of Chemistry , State University of New York at Binghamton , P.O. Box 6000, Binghamton , New York 13902 , United States.
Kaiqi ZhangDepartment of Chemistry , State University of New York at Binghamton , P.O. Box 6000, Binghamton , New York 13902 , United States.
Puja GoyalDepartment of Chemistry , State University of New York at Binghamton , P.O. Box 6000, Binghamton , New York 13902 , United States.ORCID http://orcid.org/0000-0002-5812-0481
Sozanne R SolmazDepartment of Chemistry , State University of New York at Binghamton , P.O. Box 6000, Binghamton , New York 13902 , United States.ORCID http://orcid.org/0000-0002-1703-3701
Binghamton University · USThomas Jefferson University · US

Funding

Overall (pp. 40-62)P41GM103485 · NIGMS · CORNELL UNIVERSITY · PI CERIONE, RICHARD A. · 2012 to 2018
$15.5M
Cell cycle-specific recognition of the cell nucleus as cargo for dynein-dependent transportR15GM128119 · NIGMS · STATE UNIVERSITY OF NY,BINGHAMTON · PI SOLMAZ, SOZANNE R · 2018 to 2018
$449k
NIGMS NIH HHS P41 GM103485NIGMS NIH HHS R15 GM128119
6 · The paper itself

Abstract

Dynein adaptors such as Bicaudal D2 (BicD2) recognize cargo for dynein-dependent transport, and cargo-bound adaptors are required to activate dynein for processive transport, but the mechanism of action is unknown. Here we report the X-ray structure of the cargo-binding domain of human BicD2 and investigate the structural dynamics of the coiled-coil. Our molecular dynamics simulations support the fact that BicD2 can switch from a homotypic coiled-coil registry, in which both helices of the homodimer are aligned, to an asymmetric registry, where a portion of one helix is vertically shifted, as both states are similarly stable and defined by distinct conformations of F743. The F743I variant increases dynein recruitment in the

Indexed as

AnimalsDrosophila ProteinsDyneinsHumansMicrotubule-Associated ProteinsMolecular Dynamics SimulationMuscular Atrophy, SpinalMutationPhenylalanineProtein BindingProtein Conformation, alpha-HelicalProtein DomainsBICD2 protein, humanBicD protein, DrosophilaDrosophila ProteinsDyneinsMicrotubule-Associated ProteinsPhenylalanine

Identifiers

PMID31306018
PMCPMC7243283
OpenAlexW2957907591

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.