Evidence map›Paper›PMID 31306011›Full record

ArticleJournal of medicinal chemistry2019

Optimization and Mechanistic Characterization of Pyridopyrimidine Inhibitors of Bacterial Biotin Carboxylase.

Logan D Andrews, Timothy R Kane, Paola Dozzo, Cat M Haglund, Darin J Hilderbrandt, Martin S Linsell, Timothy Machajewski, Glen McEnroe, Alisa W Serio, Kenneth B Wlasichuk and 7 more

Open access · greenAbstract read
In one paragraph

Article in Journal of medicinal chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.2field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Review
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  4. Trojan horse peptide conjugates remodel the activity spectrum of clinical antibiotics.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  11. Mining Fatty Acid Biosynthesis for New Antimicrobials.Annual review of microbiology · 2022
    Review
  12. Article
  13. Review
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  15. Article
  16. Review
  17. Compound Uptake intoACS infectious diseases · 2021
    Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 3 institutions in 1 country.

Logan D AndrewsFormer employee of Achaogen Inc. , 1 Tower Place, Suite 400 , South San Francisco , California 94080 , United States.ORCID 0000-0002-5092-4530
Timothy R KaneFormer employee of Achaogen Inc. , 1 Tower Place, Suite 400 , South San Francisco , California 94080 , United States.
Paola DozzoFormer employee of Achaogen Inc. , 1 Tower Place, Suite 400 , South San Francisco , California 94080 , United States.
Cat M HaglundFormer employee of Achaogen Inc. , 1 Tower Place, Suite 400 , South San Francisco , California 94080 , United States.
Darin J HilderbrandtFormer employee of Achaogen Inc. , 1 Tower Place, Suite 400 , South San Francisco , California 94080 , United States.
Martin S LinsellFormer employee of Achaogen Inc. , 1 Tower Place, Suite 400 , South San Francisco , California 94080 , United States.
Timothy MachajewskiFormer employee of Achaogen Inc. , 1 Tower Place, Suite 400 , South San Francisco , California 94080 , United States.
Glen McEnroeFormer employee of Achaogen Inc. , 1 Tower Place, Suite 400 , South San Francisco , California 94080 , United States.
Alisa W SerioFormer employee of Achaogen Inc. , 1 Tower Place, Suite 400 , South San Francisco , California 94080 , United States.
Kenneth B WlasichukFormer employee of Achaogen Inc. , 1 Tower Place, Suite 400 , South San Francisco , California 94080 , United States.
David B NeauNortheastern Collaborative Access Team , Argonne National Laboratory , Argonne , Illinois 60439 , United States.
Svetlana PakhomovaDepartment of Biological Sciences , Louisiana State University , Baton Rouge , Louisiana 70803 , United States.
Grover L WaldropDepartment of Biological Sciences , Louisiana State University , Baton Rouge , Louisiana 70803 , United States.
Marc SharpLinnaeus Bioscience Inc. , 3210 Merryfield Row , San Diego , California 92121 , United States.
Joe PoglianoLinnaeus Bioscience Inc. , 3210 Merryfield Row , San Diego , California 92121 , United States.ORCID 0000-0001-8989-2655
Ryan T CirzFormer employee of Achaogen Inc. , 1 Tower Place, Suite 400 , South San Francisco , California 94080 , United States.
Frederick CohenFormer employee of Achaogen Inc. , 1 Tower Place, Suite 400 , South San Francisco , California 94080 , United States.
Louisiana State University · USArgonne National Laboratory · USUniversity of California San Diego · US

Funding

User Training and OutreachP30GM124165 · NIGMS · CORNELL UNIVERSITY · PI MALCOLM S. CAPEL · 2018 to 2026
$34.2M
Overall EvaluationP41GM103403 · NIGMS · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2012 to 2017
$14.3M
Pixel Array Detector for X-ray CrystallographyS10RR029205 · NCRR · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2010 to 2010
$1.8M
Structure and property driven optimization of fatty acid synthesis inhibitors forR21AI113572 · NIAID · ACHAOGEN, INC. · PI COHEN, FREDERICK · 2014 to 2014
$407k
NCRR NIH HHS S10 RR029205NIAID NIH HHS R21 AI113572NIGMS NIH HHS P30 GM124165NIGMS NIH HHS P41 GM103403
6 · The paper itself

Abstract

A major challenge for new antibiotic discovery is predicting the physicochemical properties that enable small molecules to permeate Gram-negative bacterial membranes. We have applied physicochemical lessons from previous work to redesign and improve the antibacterial potency of pyridopyrimidine inhibitors of biotin carboxylase (BC) by up to 64-fold and 16-fold against

Indexed as

Anti-Bacterial AgentsBacterial Outer MembraneBacterial ProteinsCarbon-Nitrogen LigasesChemical PhenomenaDrug Resistance, Multiple, BacterialEscherichia coliMicrobial Sensitivity TestsModels, ChemicalMolecular StructureMutationPseudomonas aeruginosaAnti-Bacterial AgentsBacterial Proteinsbiotin carboxylaseCarbon-Nitrogen Ligases

Identifiers

PMID31306011
PMCPMC6980355
OpenAlexW2960834091

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.