Evidence map›Paper›PMID 31305987›Full record

ArticleACS chemical biology2019

Conformationally Restricted Monosaccharide-Cored Glycoside Amphiphiles: The Effect of Detergent Headgroup Variation on Membrane Protein Stability.

Aiman Sadaf, Manuel Ramos, Jonas S Mortensen, Yang Du, Hyoung Eun Bae, Chastine F Munk, Parameswaran Hariharan, Bernadette Byrne, Brian K Kobilka, Claus J Loland and 2 more

Open access · greenAbstract read
In one paragraph

Article in ACS chemical biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Glyco-Steroidal Amphiphiles (GSAs) for Membrane Protein Structural Study.Chembiochem : a European journal of chemical biology · 2022
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 4 countries.

Aiman SadafDepartment of Bionanotechnology , Hanyang University , Ansan 155-88 , Korea.
Manuel RamosDepartment of Cell Physiology and Molecular Biophysics, Center for Membrane Protein Research, School of Medicine , Texas Tech University Health Sciences Center , Lubbock , Texas 79430 , United States.
Jonas S MortensenDepartment of Neuroscience , University of Copenhagen , Copenhagen N DK-2200 , Denmark.
Yang DuDepartment of Molecular and Cellular Physiology , Stanford University , Stanford , California 94305 , United States.
Hyoung Eun BaeDepartment of Bionanotechnology , Hanyang University , Ansan 155-88 , Korea.
Chastine F MunkDepartment of Neuroscience , University of Copenhagen , Copenhagen N DK-2200 , Denmark.
Parameswaran HariharanDepartment of Cell Physiology and Molecular Biophysics, Center for Membrane Protein Research, School of Medicine , Texas Tech University Health Sciences Center , Lubbock , Texas 79430 , United States.
Bernadette ByrneDepartment of Life Sciences , Imperial College London , London SW7 2AZ , U.K.
Brian K KobilkaDepartment of Molecular and Cellular Physiology , Stanford University , Stanford , California 94305 , United States.
Claus J LolandDepartment of Neuroscience , University of Copenhagen , Copenhagen N DK-2200 , Denmark.
Lan GuanDepartment of Cell Physiology and Molecular Biophysics, Center for Membrane Protein Research, School of Medicine , Texas Tech University Health Sciences Center , Lubbock , Texas 79430 , United States.ORCID 0000-0002-2274-361X
Pil Seok ChaeDepartment of Bionanotechnology , Hanyang University , Ansan 155-88 , Korea.ORCID 0000-0003-1799-3304
Hanyang University · KRTexas Tech University · USUniversity of Copenhagen · DKStanford University · USImperial College London · GB

Funding

Integrated approaches to symport mechanisms of membrane transportersR01GM122759 · NIGMS · TEXAS TECH UNIVERSITY HEALTH SCIS CENTER · PI GUAN, LAN · 2018 to 2021
$1.4M
Recombinant expression and functional characterization of a lysophosphatidylcholine transporterR21NS105863 · NINDS · TEXAS TECH UNIVERSITY HEALTH SCIS CENTER · PI GUAN, LAN · 2018 to 2019
$421k
NIGMS NIH HHS R01 GM122759NINDS NIH HHS R21 NS105863
6 · The paper itself

Abstract

Detergents are widely used to isolate membrane proteins from lipid bilayers, but many proteins solubilized in conventional detergents are structurally unstable. Thus, there is major interest in the development of novel amphiphiles to facilitate membrane protein research. In this study, we have designed and synthesized novel amphiphiles with a rigid scyllo-inositol core, designated scyllo-inositol glycosides (SIGs). Varying the headgroup structure allowed the preparation of three sets of SIGs that were evaluated for their effects on membrane protein stability. When tested with a few model membrane proteins, representative SIGs conferred enhanced stability to the membrane proteins compared to a gold standard conventional detergent (DDM). Of the novel amphiphiles, a SIG designated STM-12 was most effective at preserving the stability of the multiple membrane proteins tested here. In addition, a comparative study of the three sets suggests that several factors, including micelle size and alkyl chain length, need to be considered in the development of novel detergents for membrane protein research. Thus, this study not only describes new detergent tools that are potentially useful for membrane protein structural study but also introduces plausible correlations between the chemical properties of detergents and membrane protein stabilization efficacy.

Indexed as

AquifexBacteriaBacterial ProteinsDetergentsGlycosidesInositolMembrane ProteinsMolecular ConformationProtein StabilityRhodobacter capsulatusSalmonella typhimuriumBacterial ProteinsDetergentsGlycosidesInositolMembrane Proteinsscyllitol

Identifiers

PMID31305987
PMCPMC7233146
OpenAlexW2962292008

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.