Evidence map›Paper›PMID 31304983›Full record

ArticleThe EMBO journal2019

Plant photoreceptors and their signaling components compete for COP1 binding via VP peptide motifs.

Kelvin Lau, Roman Podolec, Richard Chappuis, Roman Ulm, Michael Hothorn

Open access · hybridAbstract read
In one paragraph

Article in The EMBO journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 83 papers.

0numbers the graph read from it
0cells of the map it votes in
83citing papers in PubMed
32.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

83 citing papers in PubMed, 170 citations in OpenAlex.

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  9. Review
  10. Article
  11. In Silico Characterization of the RCC1 Family and the UVR8 Gene inInternational journal of molecular sciences · 2025
    Article
  12. Article
  13. Article
  14. Genome-Wide Identification and Expression Analysis of theInternational journal of molecular sciences · 2025
    Article
  15. TCP3 is a substrate of the COP1/SPA ubiquitin ligase to regulate anthocyanin accumulation and flowering time inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Photoreceptor-induced LHL4 protects the photosystem II monomer inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article

23 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Kelvin LauDepartment of Botany and Plant Biology, Section of Biology, Faculty of Sciences, University of Geneva, Geneva, Switzerland.ORCID 0000-0002-9040-7597
Roman PodolecDepartment of Botany and Plant Biology, Section of Biology, Faculty of Sciences, University of Geneva, Geneva, Switzerland.ORCID 0000-0003-2998-7892
Richard ChappuisDepartment of Botany and Plant Biology, Section of Biology, Faculty of Sciences, University of Geneva, Geneva, Switzerland.
Roman UlmDepartment of Botany and Plant Biology, Section of Biology, Faculty of Sciences, University of Geneva, Geneva, Switzerland.ORCID 0000-0001-8014-7392
Michael HothornDepartment of Botany and Plant Biology, Section of Biology, Faculty of Sciences, University of Geneva, Geneva, Switzerland.ORCID 0000-0002-3597-5698
University of Geneva · CH

Funding

EC | H2020 | H2020 Priority Excellent Science | H2020 European Research Council (ERC) 310539European Molecular Biology Organization (EMBO) ALTF 493-2015Howard Hughes Medical Institute (HHMI) 55008733Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (SNF) 31003A_175774
6 · The paper itself

Abstract

Plants sense different parts of the sun's light spectrum using distinct photoreceptors, which signal through the E3 ubiquitin ligase COP1. Here, we analyze why many COP1-interacting transcription factors and photoreceptors harbor sequence-divergent Val-Pro (VP) motifs that bind COP1 with different binding affinities. Crystal structures of the VP motifs of the UV-B photoreceptor UVR8 and the transcription factor HY5 in complex with COP1, quantitative binding assays, and reverse genetic experiments together suggest that UVR8 and HY5 compete for COP1. Photoactivation of UVR8 leads to high-affinity cooperative binding of its VP motif and its photosensing core to COP1, preventing COP1 binding to its substrate HY5. UVR8-VP motif chimeras suggest that UV-B signaling specificity resides in the UVR8 photoreceptor core. Different COP1-VP peptide motif complexes highlight sequence fingerprints required for COP1 targeting. The blue-light photoreceptors CRY1 and CRY2 also compete with transcription factors for COP1 binding using similar VP motifs. Thus, our work reveals that different photoreceptors and their signaling components compete for COP1 via a conserved mechanism to control different light signaling cascades.

Indexed as

Amino Acid MotifsAnimalsArabidopsisArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsBinding SitesChromosomal Proteins, Non-HistoneCryptochromesCrystallography, X-RayModels, MolecularPhotoreceptors, PlantProtein BindingProtein ConformationSf9 CellsSignal TransductionUbiquitin-Protein LigasesArabidopsis ProteinsAT2G32950 protein, ArabidopsisBasic-Leucine Zipper Transcription FactorsChromosomal Proteins, Non-HistoneCRY1 protein, ArabidopsisCRY2 protein, ArabidopsisCryptochromesHY5 protein, ArabidopsisPhotoreceptors, PlantUbiquitin-Protein LigasesUvr8 protein, ArabidopsisCOP1E3 ubiquitin ligaselight signalingUV-B receptorUVR8

Identifiers

PMID31304983
PMCPMC6745501
OpenAlexW2959600536

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.