Evidence map›Paper›PMID 31303482›Full record

ArticleStructure (London, England : 1993)2019

The Molecular Architecture of Native BBSome Obtained by an Integrated Structural Approach.

Hui-Ting Chou, Luise Apelt, Daniel P Farrell, Susan Roehl White, Jonathan Woodsmith, Vladimir Svetlov, Jaclyn S Goldstein, Andrew R Nager, Zixuan Li, Jean Muller and 6 more

Abstract read
In one paragraph

Article in Structure (London, England : 1993), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Recent Advances in NMR Protein Structure Prediction with ROSETTA.International journal of molecular sciences · 2023
    Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Structure and dynamics of photoreceptor sensory cilia.Pflugers Archiv : European journal of physiology · 2021
    Review
  20. ExploringMicrobial cell (Graz, Austria) · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Hui-Ting ChouDepartment of Cell Biology, Harvard Medical School, Boston, MA 02115, USA.
Luise ApeltDepartment of Molecular and Cellular Physiology, Stanford University School of Medicine, CA 94305, USA.
Daniel P FarrellDepartment of Biochemistry, University of Washington, Seattle, WA 98195, USA; Institute for Protein Design, University of Washington, Seattle, WA 98195, USA.
Susan Roehl WhiteDepartment of Molecular and Cellular Physiology, Stanford University School of Medicine, CA 94305, USA.
Jonathan WoodsmithDepartment of Pharmaceutical Chemistry, Institute of Pharmaceutical Sciences, University of Graz and BioTechMed-Graz, Graz, Austria.
Vladimir SvetlovDepartment of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, NY 10016, USA; Howard Hughes Medical Institute, New York University School of Medicine, New York, NY 10016, USA.
Jaclyn S GoldsteinDepartment of Molecular and Cellular Physiology, Stanford University School of Medicine, CA 94305, USA.
Andrew R NagerDepartment of Molecular and Cellular Physiology, Stanford University School of Medicine, CA 94305, USA.
Zixuan LiDepartment of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, NY 10016, USA; Howard Hughes Medical Institute, New York University School of Medicine, New York, NY 10016, USA.
Jean MullerLaboratoire de Génétique Médicale, UMR_S INSERM U1112, IGMA, Faculté de Médecine FMTS, Université de Strasbourg, 67091 Strasbourg, France; Laboratoires de Diagnostic Génétique, Hôpitaux Universitaires de Strasbourg, 67091 Strasbourg, France.
Hélène DollfusLaboratoire de Génétique Médicale, UMR_S INSERM U1112, IGMA, Faculté de Médecine FMTS, Université de Strasbourg, 67091 Strasbourg, France; Centre de Référence pour les Affections Rares en Génétique Ophtalmologique, CARGO, Filière SENSGENE, Hôpitaux Universitaires de Strasbourg, 67091 Strasbourg, France.
Evgeny NudlerDepartment of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, NY 10016, USA; Howard Hughes Medical Institute, New York University School of Medicine, New York, NY 10016, USA.
Ulrich StelzlDepartment of Pharmaceutical Chemistry, Institute of Pharmaceutical Sciences, University of Graz and BioTechMed-Graz, Graz, Austria.
Frank DiMaioDepartment of Biochemistry, University of Washington, Seattle, WA 98195, USA; Institute for Protein Design, University of Washington, Seattle, WA 98195, USA. Electronic address: dimaio@u.washington.edu.
Maxence V NachuryDepartment of Molecular and Cellular Physiology, Stanford University School of Medicine, CA 94305, USA; Department of Ophthalmology, University of California San Francisco, San Francisco, CA 94143, USA. Electronic address: maxence.nachury@ucsf.edu.
Thomas WalzDepartment of Cell Biology, Harvard Medical School, Boston, MA 02115, USA; Laboratory of Molecular Electron Microscopy, The Rockefeller University, New York, NY 10065, USA. Electronic address: twalz@rockefeller.edu.

Funding

Rapid-Prototyping and Design CoreP30EY002162 · NEI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LAKKARAJU, APARNA · 1985 to 2024
$16.8M
Resource for Biocomputing Visualization and InformaticsP41GM103311 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERRIN, THOMAS E · 2012 to 2017
$8.2M
Quality control of the primary cilium proteomeR01GM089933 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Maxence V Nachury · 2010 to 2026
$5.8M
Protein structure determination from low-resolution experimental dataR01GM123089 · NIGMS · UNIVERSITY OF WASHINGTON · PI DIMAIO, FRANK P · 2017 to 2025
$2.6M
Towards a structural understanding of childhood obesity in Bardet-Biedl syndromeF32GM089218 · NIGMS · STANFORD UNIVERSITY · PI WHITE, SUSAN E · 2009 to 2011
$144k
Austrian Science Fund FWF P 30162Howard Hughes Medical InstituteNEI NIH HHS P30 EY002162NIGMS NIH HHS F32 GM089218NIGMS NIH HHS P41 GM103311NIGMS NIH HHS R01 GM089933NIGMS NIH HHS R01 GM123089
6 · The paper itself

Abstract

The unique membrane composition of cilia is maintained by a diffusion barrier at the transition zone that is breached when the BBSome escorts signaling receptors out of cilia. Understanding how the BBSome removes proteins from cilia has been hampered by a lack of structural information. Here, we present a nearly complete Cα model of BBSome purified from cow retina. The model is based on a single-particle cryo-electron microscopy density map at 4.9-Å resolution that was interpreted with the help of comprehensive Rosetta-based structural modeling constrained by crosslinking mass spectrometry data. We find that BBSome subunits have a very high degree of interconnectivity, explaining the obligate nature of the complex. Furthermore, like other coat adaptors, the BBSome exists in an autoinhibited state in solution and must thus undergo a conformational change upon recruitment to membranes by the small GTPase ARL6/BBS3. Our model provides the first detailed view of the machinery enabling ciliary exit.

Indexed as

ADP-Ribosylation FactorsAnimalsCattleCryoelectron MicroscopyHomeostasisHumansMass SpectrometryMicrotubule-Associated ProteinsModels, MolecularProtein ConformationProtein MultimerizationRetinaADP-Ribosylation FactorsMicrotubule-Associated ProteinsBBSomeciliatrafficking

Identifiers

PMID31303482
PMCPMC6726506

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.