Evidence map›Paper›PMID 31302867›Full record

ArticlePlant molecular biology2019

The C-terminal cysteine-rich motif of NYE1/SGR1 is indispensable for its function in chlorophyll degradation in Arabidopsis.

Zuokun Xie, Shengdong Wu, Junyi Chen, Xiaoyu Zhu, Xin Zhou, Stefan Hörtensteiner, Guodong Ren, Benke Kuai

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Plant molecular biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
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  4. Chlorophyllase fromACS bio & med chem Au · 2024
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  7. The AlkB Homolog SlALKBH10B Negatively Affects Drought and Salt Tolerance inInternational journal of molecular sciences · 2023
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  8. Homolog of PeaGenes · 2023
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  10. An evergreen mind and a heart for the colors of fall.Journal of experimental botany · 2021
    Article
  11. Review
  12. Article
  13. Review
  14. International journal of molecular sciences · 2020
    Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Zuokun XieState Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai, 200438, China.
Shengdong WuState Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai, 200438, China.
Junyi ChenState Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai, 200438, China.
Xiaoyu ZhuState Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai, 200438, China.
Xin ZhouState Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai, 200438, China.
Stefan HörtensteinerInstitute of Plant and Microbial Biology, University of Zurich, Zollikerstrasse 107, Zurich, 8008, Switzerland.
Guodong RenState Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai, 200438, China. gdren@fudan.edu.cn.
Benke KuaiState Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai, 200438, China. bkkuai@fudan.edu.cn.
Fudan University · CNUniversity of Zurich · CH

Funding

National Natural Science Foundation of China 31670287Science and Technology Commission of Shanghai Municipality 2015JC1400800Swiss National Science Foundation 31003A_172977
6 · The paper itself

Abstract

key messageThe C-terminal cysteine-rich motif of NYE1/SGR1 affects chlorophyll degradation likely by mediating its self-interaction and conformational change, and somehow altering its Mg-dechelating activity in response to the changing redox potential. During green organ senescence in plants, the most prominent phenomenon is the degreening caused by net chlorophyll (Chl) loss. NON-YELLOWING1/STAY-GREEN1 (NYE1/SGR1) was recently reported to be able to dechelates magnesium (Mg) from Chl a to initiate its degradation, but little is known about the domain/motif basis of its functionality. In this study, we carried out a protein truncation assay and identified a conserved cysteine-rich motif (CRM, P-X3-C-X3-C-X-C2-F-P-X5-P) at its C terminus, which is essential for its function. Genetic analysis showed that all four cysteines in the CRM were irreplaceable, and enzymatic assays demonstrated that the mutation of each of the four cysteines affected its Mg-dechelating activity. The CRM plays a critical role in the conformational change and self-interaction of NYE1 via the formation of inter- and intra-molecular disulfide bonds. Our results may provide insight into how NYE1 responds to rapid redox changes during leaf senescence and in response to various environmental stresses.

Indexed as

Amino Acid MotifsArabidopsisArabidopsis ProteinsChelating AgentsChlorophyllChloroplast ProteinsDisulfidesDNA, ComplementaryGene Expression Regulation, PlantMagnesiumOxidation-ReductionPhenotypePlant LeavesPlants, Genetically ModifiedProtein ConformationProtein DomainsArabidopsis ProteinsChelating AgentsChlorophyllChloroplast ProteinsDisulfidesDNA, ComplementaryMagnesiumSGR1 protein, ArabidopsisArabidopsisChlorophyll degradationCysteine-rich motifNYE1/SGR1Redox regulation

Identifiers

PMID31302867
OpenAlexW2956470494

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.