Evidence map›Paper›PMID 31302865›Full record

ArticleGenes & genomics2019

Association analysis of polymorphism in the NR6A1 gene with the lumbar vertebrae number traits in sheep.

Xiangyu Zhang, Cunyuan Li, Xiaoyue Li, Zhijin Liu, Wei Ni, Yang Cao, Yang Yao, Esenbay Islamov, Junchang Wei, Xiaoxu Hou and 1 more

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Article in Genes & genomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
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  5. The expanding roles of Nr6a1 in development and evolution.Frontiers in cell and developmental biology · 2024
    Review
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  9. Article
  10. Multi-Thoracolumbar Variations andAnimals : an open access journal from MDPI · 2022
    Article
  11. Identification ofFrontiers in genetics · 2022
    Article
  12. Article
  13. Article
  14. A Novel 13 bp Deletion within theAnimals : an open access journal from MDPI · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Xiangyu ZhangAnimal Genetic Engineering Laboratory, College of Life Sciences, Shihezi University, Shihezi, 832003, Xinjiang, China.
Cunyuan LiAnimal Genetic Engineering Laboratory, College of Life Sciences, Shihezi University, Shihezi, 832003, Xinjiang, China.
Xiaoyue LiAnimal Genetic Engineering Laboratory, College of Life Sciences, Shihezi University, Shihezi, 832003, Xinjiang, China.
Zhijin LiuAnimal Genetic Engineering Laboratory, College of Life Sciences, Shihezi University, Shihezi, 832003, Xinjiang, China.
Wei NiAnimal Genetic Engineering Laboratory, College of Life Sciences, Shihezi University, Shihezi, 832003, Xinjiang, China. niweiwonderful@sina.com.
Yang CaoAnimal Genetic Engineering Laboratory, College of Life Sciences, Shihezi University, Shihezi, 832003, Xinjiang, China.
Yang YaoAnimal Genetic Engineering Laboratory, College of Life Sciences, Shihezi University, Shihezi, 832003, Xinjiang, China.
Esenbay IslamovKazakh National Agrarian University, Almaty, Republic of Kazakhstan, 050010.
Junchang WeiAnimal Genetic Engineering Laboratory, College of Life Sciences, Shihezi University, Shihezi, 832003, Xinjiang, China.
Xiaoxu HouAnimal Genetic Engineering Laboratory, College of Life Sciences, Shihezi University, Shihezi, 832003, Xinjiang, China.
Shengwei HuAnimal Genetic Engineering Laboratory, College of Life Sciences, Shihezi University, Shihezi, 832003, Xinjiang, China. hushengwei@163.com.ORCID http://orcid.org/0000-0002-9455-6418
Shihezi University · CNKazakh National Agrarian Research University · KZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionThe vertebral number is an economically significant trait, which is associated with body length and carcass traits. Nuclear Receptor Subfamily 6, Group A, Member 1 (NR6A1) is a member of the nuclear receptor superfamily and it plays an important role in the early development of embryos.

objectivesThe NR6A1 gene was considered as an important candidate for influence vertebrae number, while the potential associations between this gene and the number of lumbar vertebrae traits of sheep have not been explored.

methodsIn this study, we detected the genetic variants of NR6A1 gene and analyzed the associations of the polymorphisms with lumbar number traits in 130 Kazakh sheep. We use single-strand conformation polymorphism (SSCP) technique to detect single nucleotide polymorphism (SNP) of NR6A1 gene, and the association of the genotype and lumbar number variation was analyzed by independent Chi-square test.

resultsWe detect SNP of NR6A1 gene by PCR-SSCP technique, and polymorphisms were only found in the coding region of exon-6 and exon-8 of NR6A1 gene. In order to investigate the connection between the SNP locus and lumbar number traits in sheep, we conducted a Chi-square test for independence for exon-6 and exon-8 of NR6A1 gene, respectively. Association analysis revealed significant associations between the SNP (rs414302710: A >C) in the exon-8 of NR6A1 gene with the number of lumbar vertebrae (P < 0.01).

conclusionOur study indicated that this SNP (rs414302710: A>C) locus of exon-8 of NR6A1 gene in sheep possible influence the number of lumbar vertebrae, which has the potential to be applied in selective breeding of sheep.

Indexed as

Lumbar VertebraePhenotypePolymorphism, Single NucleotideAnimalsBase SequenceBreedingExonsGenotypeNuclear Receptor Subfamily 6, Group A, Member 1Sequence AnalysisSheepNuclear Receptor Subfamily 6, Group A, Member 1Lumbar vertebraeNR6A1 geneSNPSSCP

Identifiers

PMID31302865
OpenAlexW2961653839

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.