Evidence map›Paper›PMID 31302787›Full record

ArticleFunctional & integrative genomics2020

Identification of Fusarium graminearum-responsive miRNAs and their targets in wheat by sRNA sequencing and degradome analysis.

Xiaojie Jin, Linlin Jia, Yongxia Wang, Baoquan Li, Dongfa Sun, Xueyan Chen

Abstract read
PubMed Publisher
In one paragraph

Article in Functional & integrative genomics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
4.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Review
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  4. An3 Biotech · 2025
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  5. Genome-Wide Transcriptional Response of Avocado toPlants (Basel, Switzerland) · 2024
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  6. Analyzing the defense response mechanism ofFrontiers in plant science · 2024
    Article
  7. Article
  8. Tae-miR397 Negatively Regulates Wheat Resistance toPlants (Basel, Switzerland) · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Xiaojie JinCrop Designing Centre, Henan Academy of Agricultural Sciences, Zhengzhou, 450002, China. xiaojiejin26@163.com.ORCID http://orcid.org/0000-0003-0451-9339
Linlin JiaCrop Designing Centre, Henan Academy of Agricultural Sciences, Zhengzhou, 450002, China.
Yongxia WangCrop Designing Centre, Henan Academy of Agricultural Sciences, Zhengzhou, 450002, China.
Baoquan LiCrop Designing Centre, Henan Academy of Agricultural Sciences, Zhengzhou, 450002, China.
Dongfa SunCollege of Plant Science and Technology, Huazhong Agricultural University, Wuhan, 430070, China. sundongfa1@mail.hzau.edu.cn.
Xueyan ChenBiotechnology Research Centre, Shandong Academy of Agricultural Sciences, Jinan, 250100, China.
Henan Academy of Agricultural Sciences · CNHuazhong Agricultural University · CNShandong Academy of Agricultural Sciences · CN

Funding

Independent Innovation Foundation of Henan Academy of Agricultural Sciences 2017ZC73Programs for Science and Technology Development of Henan Province 182102110439
6 · The paper itself

Abstract

Fusarium head blight (FHB), a prevalent disease of bread wheat (Triticum aestivum L.) caused by Fusarium graminearum, leads to considerable losses of yield and quality in wheat production. MicroRNAs (miRNAs) are important regulators of plant defense responses. Here, to better understand the F. graminearum-responsive miRNAs, we constructed sRNA libraries for wheat cultivar Sumai 3 challenged with F. graminearum and sterile water, respectively. As a result, a total of 203 known miRNAs from 46 families and 68 novel miRNAs were identified. Among them, 18 known and six novel miRNAs were found to be differentially expressed between the F. graminearum-infected samples and the controls and thus were considered to be responsive to F. graminearum. The expression patterns of eight miRNAs were further validated by stem-loop qRT-PCR. Meanwhile, target genes were validated by degradome sequencing. Integrative analysis of the differentially expressed miRNAs and their targets revealed complex miRNA-mediated regulatory networks involved in the response of wheat to F. graminearum infection. Our findings are expected to facilitate a better understanding of the miRNA regulation in wheat-F. graminearum interaction.

Indexed as

FusariumGene Expression Regulation, PlantHigh-Throughput Nucleotide SequencingMicroRNAsPlant DiseasesRNA, MessengerRNA, Small UntranslatedSequence Analysis, RNATriticumMicroRNAsRNA, MessengerRNA, Small UntranslatedFusarium graminearumMicroRNAWheatWheat-F. graminearum interaction

Identifiers

PMID31302787
OpenAlexW2960615249

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.