Evidence map›Paper›PMID 31302786›Full record

ArticleMikrochimica acta2019

Graphene oxide-based fluorometric determination of microRNA-141 using rolling circle amplification and exonuclease III-aided recycling amplification.

Mei Li, Xiong Xu, QingYou Cai, XuJian Luo, ZhongGao Zhou, GuoHai Xu, YongRong Xie

Abstract read
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In one paragraph

Article in Mikrochimica acta, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Mei LiKey Laboratory of Jiangxi University for Functional Material Chemistry, College of Chemistry & Chemical Engineering, Gannan Normal University, Ganzhou, 341000, Jiangxi, China. meili2390@163.com.
Xiong XuKey Laboratory of Jiangxi University for Functional Material Chemistry, College of Chemistry & Chemical Engineering, Gannan Normal University, Ganzhou, 341000, Jiangxi, China.
QingYou CaiCollege of Mathematics and Computer Sciences, Gannan Normal University, Ganzhou, 341000, Jiangxi, China.
XuJian LuoSchool of Chemical & Food Science, Yulin Normal University, Yulin, 537000, Guangxi, China.
ZhongGao ZhouKey Laboratory of Jiangxi University for Functional Material Chemistry, College of Chemistry & Chemical Engineering, Gannan Normal University, Ganzhou, 341000, Jiangxi, China.
GuoHai XuKey Laboratory of Jiangxi University for Functional Material Chemistry, College of Chemistry & Chemical Engineering, Gannan Normal University, Ganzhou, 341000, Jiangxi, China.
YongRong XieKey Laboratory of Jiangxi University for Functional Material Chemistry, College of Chemistry & Chemical Engineering, Gannan Normal University, Ganzhou, 341000, Jiangxi, China. xieyr@gnnu.edu.cn.
Gannan Normal University · CNYulin Normal University · CN

Funding

National Natural Science Foundation of China 21241005National Natural Science Foundation of China 21461002National Natural Science Foundation of China 21562002Open Fund of Key Laboratory of Jiangxi University for Functional Materials Chemistry FMC15104the Science Technology Project of Jiangxi Provincial Department of Education 461392
6 · The paper itself

Abstract

A graphene oxide-based method has been developed for ultrasensitive and selective determination of microRNA-141 by means of rolling circle amplification (RCA) and exonuclease III (Exo III)-assisted recycling amplification. The method uses (a) a padlock probe with a hybrid sequence that is complementary to the target microRNA-141 at both the 5'- and the 3'-end, and (b) a long binding region of a signalling reporter strand. On addition of microRNA-141, it acts as the primer for triggering the RCA reaction following ligation. This results in the formation of a repeatedly concatenated sequence of the padlock probe. Subsequently, the RCA product hybridizes with the fluorescein-labelled signal strand to form the duplex DNA containing the blunt 3'-termini of signal strand. Addition of Exo III causes signal strand digestion and leads to RCA product recycling and liberation of fluorescein. Added graphene oxide does not absorb the fluorescein liberated because of the poor mutual interaction. Therefore, microRNA-141 can be quantified by measurement of the green fluorescence under excitation/emission wavelengths of 470/520 nm. The method has a 100 aM detection limit towards microRNA-141 and works in the wide range from 1 fM to 1 nM. It can discriminate even single-mismatched microRNA and shows good selectivity and sensitivity when applied to spiked human serum. Graphical abstract Schematic representation of a graphene oxide (GO)-based method for fluorometric determination of microRNA by using rolling circle amplification and exonuclease III (Exo III)-aided recycling amplification. With microRNA, the fluorescein-labelled signal strand becomes digested, and this genererates a fluorescent signal.

Indexed as

DNA PrimersExodeoxyribonucleasesFluorometryGraphiteHumansLimit of DetectionMicroRNAsNucleic Acid Amplification TechniquesReproducibility of ResultsDNA Primersexodeoxyribonuclease IIIExodeoxyribonucleasesgraphene oxideGraphiteMicroRNAsMIRN141 microRNA, humanDNA polymeraseExo III digestionFluorescein-labelFluorescence detectionGraphene oxide quenchingMicroRNAPadlock probeSerum samplesSignal amplificationSignal strand

Identifiers

PMID31302786
OpenAlexW2960283006

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.