Evidence map›Paper›PMID 31301121›Full record

ArticleAmerican journal of medical genetics. Part A2019

GATA6 mutations: Characterization of two novel patients and a comprehensive overview of the GATA6 genotypic and phenotypic spectrum.

Doris Škorić-Milosavljević, Fleur V Y Tjong, Julien Barc, Ad P C M Backx, Sally-Ann B Clur, Karin van Spaendonck-Zwarts, Roelof-Jan Oostra, Najim Lahrouchi, Leander Beekman, Regina Bökenkamp and 5 more

Open access · hybridAbstract read
In one paragraph

Article in American journal of medical genetics. Part A, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Article
  3. An animal model recapitulates human hepatic diseases associated withProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. Article
  5. Article
  6. Intricate MIB1-NOTCH-GATA6 Interactions in Cardiac Valvular and Septal Development.Journal of cardiovascular development and disease · 2024
    Article
  7. Article
  8. Review
  9. Review
  10. Human Genetics of Truncus Arteriosus.Advances in experimental medicine and biology · 2024
    Review
  11. Article
  12. Clinical characteristics and genetic analysis of a child with specific type of diabetes mellitus caused by missense mutation ofZhejiang da xue xue bao. Yi xue ban = Journal of Zhejiang University. Medical sciences · 2023
    Article
  13. Article
  14. Article
  15. Review
  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 1 country.

Doris Škorić-MilosavljevićDepartment of Clinical and Experimental Cardiology, Amsterdam UMC, University of Amsterdam, Heart Centre, Amsterdam, The Netherlands.ORCID 0000-0001-7089-3703
Fleur V Y TjongDepartment of Clinical and Experimental Cardiology, Amsterdam UMC, University of Amsterdam, Heart Centre, Amsterdam, The Netherlands.
Julien BarcDepartment of Clinical and Experimental Cardiology, Amsterdam UMC, University of Amsterdam, Heart Centre, Amsterdam, The Netherlands.
Ad P C M BackxDepartment of Pediatric Cardiology, Amsterdam UMC, Emma Children's Hospital, Amsterdam, The Netherlands.
Sally-Ann B ClurDepartment of Pediatric Cardiology, Amsterdam UMC, Emma Children's Hospital, Amsterdam, The Netherlands.
Karin van Spaendonck-ZwartsDepartment of Clinical Genetics, Amsterdam UMC, University of Amsterdam, Amsterdam, The Netherlands.
Roelof-Jan OostraDepartment of Medical Biology, Amsterdam UMC, University of Amsterdam, Amsterdam, The Netherlands.
Najim LahrouchiDepartment of Clinical and Experimental Cardiology, Amsterdam UMC, University of Amsterdam, Heart Centre, Amsterdam, The Netherlands.
Leander BeekmanDepartment of Clinical and Experimental Cardiology, Amsterdam UMC, University of Amsterdam, Heart Centre, Amsterdam, The Netherlands.
Regina BökenkampDepartment of Pediatric Cardiology, Leiden University Medical Center, Leiden, The Netherlands.
Daniela Q C M Barge-SchaapveldDepartment of Clinical Genetics, Leiden University Medical Center, Leiden, The Netherlands.
Barbara J MulderDepartment of Clinical and Experimental Cardiology, Amsterdam UMC, University of Amsterdam, Heart Centre, Amsterdam, The Netherlands.
Elisabeth M LodderDepartment of Clinical and Experimental Cardiology, Amsterdam UMC, University of Amsterdam, Heart Centre, Amsterdam, The Netherlands.
Connie R BezzinaDepartment of Clinical and Experimental Cardiology, Amsterdam UMC, University of Amsterdam, Heart Centre, Amsterdam, The Netherlands.
Alex V PostmaDepartment of Clinical Genetics, Amsterdam UMC, University of Amsterdam, Amsterdam, The Netherlands.
Amsterdam Neuroscience · NLEmma Kinderziekenhuis · NLLeiden University Medical Center · NLAmsterdam University Medical Centers · NL

Funding

Children's Heart FoundationHartstichting 2014T053Hartstichting CVON 2014-18
6 · The paper itself

Abstract

The first human mutations in GATA6 were described in a cohort of patients with persistent truncus arteriosus, and the phenotypic spectrum has expanded since then. This study underscores the broad phenotypic spectrum by presenting two patients with de novo GATA6 mutations, both exhibiting complex cardiac defects, pancreatic, and other abnormalities. Furthermore, we provided a detailed overview of all published human genetic variation in/near GATA6 published to date and the associated phenotypes (n = 78). We conclude that the most common phenotypes associated with a mutation in GATA6 were structural cardiac and pancreatic abnormalities, with a penetrance of 87 and 60%, respectively. Other common malformations were gallbladder agenesis, congenital diaphragmatic hernia, and neurocognitive abnormalities, mostly developmental delay. Fifty-eight percent of the mutations were de novo, and these patients more often had an anomaly of intracardiac connections, an anomaly of the great arteries, and hypothyroidism, compared with those with inherited mutations. Functional studies mostly support loss-of-function as the pathophysiological mechanism. In conclusion, GATA6 mutations give a wide range of phenotypic defects, most frequently malformations of the heart and pancreas. This highlights the importance of detailed clinical evaluation of identified carriers to evaluate their full phenotypic spectrum.

Indexed as

AdultChildExome SequencingGallbladderGATA6 Transcription FactorGenetic Predisposition to DiseaseGenotypeHeartHeart Defects, CongenitalHernias, Diaphragmatic, CongenitalHeterozygoteHumansLoss of Function MutationMaleMutationPancreasGATA6 protein, humanGATA6 Transcription Factorcongenital heart diseaseGATA6heartmutationpancreasphenotypic spectrum

Identifiers

PMID31301121
PMCPMC6772993
OpenAlexW2957028174

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.