Evidence map›Paper›PMID 31300537›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2019

CRISPR-Cas9-mediated gene knockout in intestinal tumor organoids provides functional validation for colorectal cancer driver genes.

Haruna Takeda, Shiho Kataoka, Mizuho Nakayama, Mohamed A E Ali, Hiroko Oshima, Daisuke Yamamoto, Jun-Won Park, Yujiro Takegami, Tadaichi An, Nancy A Jenkins and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 97 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
97citing papers in PubMed, 1 pooled it
6.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

97 citing papers in PubMed, 1 synthesis or guideline pooled it, 169 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Review

37 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Haruna TakedaCancer Genes and Genomes Unit, Cancer Research Institute, Kanazawa University, 920-1192 Kanazawa, Ishikawa, Japan; hartaked@ncc.go.jp ncopeland1@mdanderson.org.
Shiho KataokaCancer Genes and Genomes Unit, Cancer Research Institute, Kanazawa University, 920-1192 Kanazawa, Ishikawa, Japan.
Mizuho NakayamaDivision of Genetics, Cancer Research Institute, Kanazawa University, 920-1192 Kanazawa, Ishikawa, Japan.
Mohamed A E AliDivision of Experimental Therapeutics, Cancer Research Institute, Kanazawa University, 920-1192 Kanazawa, Ishikawa, Japan.
Hiroko OshimaDivision of Genetics, Cancer Research Institute, Kanazawa University, 920-1192 Kanazawa, Ishikawa, Japan.
Daisuke YamamotoDivision of Genetics, Cancer Research Institute, Kanazawa University, 920-1192 Kanazawa, Ishikawa, Japan.
Jun-Won ParkDivision of Genetics, Cancer Research Institute, Kanazawa University, 920-1192 Kanazawa, Ishikawa, Japan.
Yujiro TakegamiDNAFORM Precision Gene Technologies, 230-0046 Yokohama, Kanagawa, Japan.
Tadaichi AnDNAFORM Precision Gene Technologies, 230-0046 Yokohama, Kanagawa, Japan.
Nancy A JenkinsGenetics Department, The University of Texas MD Anderson Cancer Center, Houston, TX 77030.
Neal G CopelandGenetics Department, The University of Texas MD Anderson Cancer Center, Houston, TX 77030 hartaked@ncc.go.jp ncopeland1@mdanderson.org.
Masanobu OshimaDivision of Genetics, Cancer Research Institute, Kanazawa University, 920-1192 Kanazawa, Ishikawa, Japan.
Kanazawa University · JPThe University of Texas MD Anderson Cancer Center · USIshikawa Prefectural Central Hospital · JPLife Science Institute · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Colorectal cancer (CRC) is the third leading cause of cancer-related deaths worldwide. Several genome sequencing studies have provided comprehensive CRC genomic datasets. Likewise, in our previous study, we performed genome-wide

Indexed as

Colorectal NeoplasmsCRISPR-Cas SystemsGene Expression ProfilingGene Knockout TechniquesNeoplasm ProteinsOrganoidsAnimalsCell Line, TumorHumansMiceMice, Inbred NODNeoplasm Proteinsactivincolorectal cancerCRISPR-Cas9driver geneorganoid

Identifiers

PMID31300537
PMCPMC6681705
OpenAlexW2959016616

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.