Evidence map›Paper›PMID 31299954›Full record

ArticleRespiratory research2019

Multi-level immune response network in mild-moderate Chronic Obstructive Pulmonary Disease (COPD).

Tamara Cruz, Alejandra López-Giraldo, Guillaume Noell, Sandra Casas-Recasens, Tamara Garcia, Laureano Molins, Manel Juan, Marco A Fernandez, Alvar Agustí, Rosa Faner

Open access · goldAbstract read
In one paragraph

Article in Respiratory research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 47 citations in OpenAlex.

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  20. SARS-CoV-2 infection and smoking: What is the association? A brief review.Computational and structural biotechnology journal · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Tamara CruzCIBER Enfermedades Respiratorias, Barcelona, Spain.
Alejandra López-GiraldoCIBER Enfermedades Respiratorias, Barcelona, Spain.
Guillaume NoellCIBER Enfermedades Respiratorias, Barcelona, Spain.
Sandra Casas-RecasensCIBER Enfermedades Respiratorias, Barcelona, Spain.
Tamara GarciaCIBER Enfermedades Respiratorias, Barcelona, Spain.
Laureano MolinsRespiratory Institute, Hospital Clinic, University of Barcelona, Barcelona, Spain.
Manel JuanImmunology Service, Centre Diagnostic Biomèdic, Hospital Clinic, University of Barcelona, Barcelona, Spain.
Marco A FernandezFlow Cytometry Facility, Institut de Recerca Germans Trias I Pujol, Barcelona, Spain.
Alvar AgustíCIBER Enfermedades Respiratorias, Barcelona, Spain.
Rosa FanerCIBER Enfermedades Respiratorias, Barcelona, Spain. rfaner@clinic.cat.ORCID http://orcid.org/0000-0002-8159-0115
Centro de Investigación Biomédica en Red de Enfermedades Respiratorias · ESUniversitat de Barcelona · ESInstitut d'Investigació en Ciències de la Salut Germans Trias i Pujol · ES

Funding

Instituto de Salud Carlos III PI17/000369, PI18/0103,CP16/00039
6 · The paper itself

Abstract

backgroundChronic Obstructive Pulmonary Disease (COPD) is associated with an abnormal pulmonary and systemic immune response to tobacco smoking. Yet, how do immune cells relate within and between these two biological compartments, how the pulmonary infiltrate influences the lung transcriptome, and what is the role of active smoking vs. presence of disease is unclear.

methodsTo investigate these questions, we simultaneously collected lung tissue and blood from 65 individuals stratified by smoking habit and presence of the disease. The immune cell composition of both tissues was assessed by flow cytometry, whole lung transcriptome was determined with Affymetrix arrays, and we used Weighted Gene Co-expression Network Analysis (WGCNA) to integrate results.

resultsMain results showed that: (1) current smoking and the presence of COPD were both independently associated with a reduction in the proportion of lung T cells and an increase of macrophages, specifically those expressing CD80 + CD163+; (2) changes in the proportion of infiltrating macrophages, smoking status or the level of airflow limitation were associated to different WGCNA modules, which were enriched in iron ion transport, extracellular matrix and cilium organization gene ontologies; and, (3) circulating white blood cells counts were correlated with lung macrophages and T cells.

conclusionsMild-moderated COPD lung immune infiltrate is associated with the active smoking status and presence of disease; is associated with changes in whole lung tissue transcriptome and marginally reflected in blood.

Indexed as

AgedDendritic CellsFemaleHumansImmunity, CellularLungMaleMiddle AgedProspective StudiesPulmonary Disease, Chronic ObstructiveT-LymphocytesTranscriptomeChronic bronchitisEmphysemaFlow cytometryNetwork analysisTranscriptome

Identifiers

PMID31299954
PMCPMC6626346
OpenAlexW2962549599

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.