Evidence map›Paper›PMID 31297569›Full record

ArticleImmunogenetics2019

Methylation of H3K27 and H3K4 in key gene promoter regions of thymus in RA mice is involved in the abnormal development and differentiation of iNKT cells.

Ming Meng, Huifang Liu, Shengde Chen, Huijuan Zhao, Xiang Gao, Jingnan Zhang, Dongzhi Chen

Abstract read
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In one paragraph

Article in Immunogenetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Stability of housekeeping genes in inflamed joints of spontaneous and collagen-induced arthritis in DBA/1 mice.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2021
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  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Ming MengMedical School of Hebei University, Baoding, People's Republic of China.
Huifang LiuMedical School of Hebei University, Baoding, People's Republic of China.
Shengde ChenMedical School of Hebei University, Baoding, People's Republic of China.
Huijuan ZhaoMedical School of Hebei University, Baoding, People's Republic of China.
Xiang GaoMedical School of Hebei University, Baoding, People's Republic of China.
Jingnan ZhangMedical School of Hebei University, Baoding, People's Republic of China.
Dongzhi ChenMedical School of Hebei University, Baoding, People's Republic of China. chenddzz@163.com.
Hebei University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Epigenetic modifications have been shown to be important for immune cell differentiation by regulating gene transcription. However, the role and mechanism of histone methylation in the development and differentiation of iNKT cells in rheumatoid arthritis (RA) mice have yet to be deciphered. The DBA/1 mouse RA model was established by using a modified GPI mixed peptide. We demonstrated that total peripheral blood, thymus, and spleen iNKT cells in RA mice decreased significantly, while iNKT1 in the thymus and spleen was increased significantly. PLZF protein and PLZF mRNA levels were significantly decreased in thymus DP T cells, while T-bet protein and mRNA were significantly increased in thymus iNKT cells. We found a marked accumulation in H3K27me3 around the promoter regions of the signature gene Zbtb16 in RA mice thymus DP T cells, and an accumulation of H3K4me3 around the promoters of the Tbx21 gene in iNKT cells. The expression levels of UTX in the thymus of RA mice were significantly reduced. The changes in the above indicators were particularly significant in the progressive phase of inflammation (11 days after modeling) and the peak phase of inflammation (14 days after modeling) in RA mice. Developmental and differentiation defects of iNKT cells in RA mice were associated with abnormal methylation levels (H3K27me3 and H3K4me3) in the promoters of key genes Zbtb16 (encoding PLZF) and Tbx21 (encoding T-bet). Decreased UTX of thymus histone demethylase levels resulted in the accumulation of H3K27me3 modification.

Indexed as

Promoter Regions, GeneticAnimalsArthritis, ExperimentalArthritis, RheumatoidCell DifferentiationEpigenesis, GeneticGene Expression RegulationHistone DemethylasesLysineMethylationMice, Inbred DBANatural Killer T-CellsPromyelocytic Leukemia Zinc Finger ProteinSpleenT-bet Transcription FactorT-Box Domain ProteinsHistone DemethylasesLysinePromyelocytic Leukemia Zinc Finger ProteinT-bet Transcription FactorT-Box Domain ProteinsUtx protein, mouseZbtb16 protein, mouseEpigeneticH3K27me3H3K4me3iNKTRAUTX

Identifiers

PMID31297569
OpenAlexW2960966769

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.