Evidence map›Paper›PMID 31296851›Full record

ArticleNature communications2019

Zinc-binding to the cytoplasmic PAS domain regulates the essential WalK histidine kinase of Staphylococcus aureus.

Ian R Monk, Nausad Shaikh, Stephanie L Begg, Mike Gajdiss, Liam K R Sharkey, Jean Y H Lee, Sacha J Pidot, Torsten Seemann, Michael Kuiper, Brit Winnen and 11 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 52 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 5 institutions in 1 country.

Ian R MonkDepartment of Microbiology and Immunology, Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, VIC, 3000, Australia. ian.monk@unimelb.edu.au.
Nausad ShaikhInstitute for Molecular Bioscience, The University of Queensland, St Lucia, QLD, 4067, Australia.
Stephanie L BeggDepartment of Microbiology and Immunology, Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, VIC, 3000, Australia.
Mike GajdissUniversity Clinics of Bonn, Institute of Medical Microbiology, Immunology and Parasitology, 53127, Bonn, Germany.
Liam K R SharkeyDepartment of Microbiology and Immunology, Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, VIC, 3000, Australia.ORCID http://orcid.org/0000-0001-9324-8678
Jean Y H LeeDepartment of Microbiology and Immunology, Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, VIC, 3000, Australia.ORCID http://orcid.org/0000-0001-5751-8503
Sacha J PidotDepartment of Microbiology and Immunology, Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, VIC, 3000, Australia.ORCID http://orcid.org/0000-0003-1202-6614
Torsten SeemannDepartment of Microbiology and Immunology, Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, VIC, 3000, Australia.ORCID http://orcid.org/0000-0001-6046-610X
Michael KuiperCSIRO Data61, Canberra, ACT, 2601, Australia.
Brit Winnen
Rikki HvorupInstitute for Molecular Bioscience, The University of Queensland, St Lucia, QLD, 4067, Australia.
Brett M CollinsInstitute for Molecular Bioscience, The University of Queensland, St Lucia, QLD, 4067, Australia.
Gabriele BierbaumUniversity Clinics of Bonn, Institute of Medical Microbiology, Immunology and Parasitology, 53127, Bonn, Germany.
Saumya R UdagedaraDepartment of Biochemistry and Genetics, La Trobe Institute for Molecular Science, La Trobe University, Melbourne, VIC, 3086, Australia.
Jacqueline R MoreyDepartment of Molecular and Biomedical Sciences, School of Biological Sciences, The University of Adelaide, Adelaide, SA, 5005, Australia.ORCID http://orcid.org/0000-0003-4544-5997
Neha PulyaniDepartment of Biochemistry and Genetics, La Trobe Institute for Molecular Science, La Trobe University, Melbourne, VIC, 3086, Australia.
Benjamin P HowdenDepartment of Microbiology and Immunology, Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, VIC, 3000, Australia.ORCID http://orcid.org/0000-0003-0237-1473
Megan J MaherDepartment of Biochemistry and Genetics, La Trobe Institute for Molecular Science, La Trobe University, Melbourne, VIC, 3086, Australia.ORCID http://orcid.org/0000-0003-0848-9640
Christopher A McDevittDepartment of Microbiology and Immunology, Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, VIC, 3000, Australia.ORCID http://orcid.org/0000-0003-1596-4841
Glenn F KingInstitute for Molecular Bioscience, The University of Queensland, St Lucia, QLD, 4067, Australia.
Timothy P StinearDepartment of Microbiology and Immunology, Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, VIC, 3000, Australia. tstinear@unimelb.edu.au.ORCID http://orcid.org/0000-0003-0150-123X
The University of Melbourne · AUThe University of Queensland · AULa Trobe University · AUCommonwealth Scientific and Industrial Research Organisation · AUThe University of Adelaide · AU

Funding

Department of Education and Training | Australian Research Council (ARC) DP170102102Department of Education and Training | Australian Research Council (ARC) FT170100006Department of Health | National Health and Medical Research Council (NHMRC) GNT1010776Department of Health | National Health and Medical Research Council (NHMRC) GNT1044414Department of Health | National Health and Medical Research Council (NHMRC) GNT1049192Department of Health | National Health and Medical Research Council (NHMRC) GNT1105525Department of Health | National Health and Medical Research Council (NHMRC) GNT1105905Department of Health | National Health and Medical Research Council (NHMRC) GNT1129589Department of Health | National Health and Medical Research Council (NHMRC) GNT1136021Department of Health | National Health and Medical Research Council (NHMRC) GNT1142695Department of Health | National Health and Medical Research Council (NHMRC) GNT1145075
6 · The paper itself

Abstract

WalKR (YycFG) is the only essential two-component regulator in the human pathogen Staphylococcus aureus. WalKR regulates peptidoglycan synthesis, but this function alone does not explain its essentiality. Here, to further understand WalKR function, we investigate a suppressor mutant that arose when WalKR activity was impaired; a histidine to tyrosine substitution (H271Y) in the cytoplasmic Per-Arnt-Sim (PAS

Indexed as

Amino Acid SubstitutionBacterial ProteinsCations, DivalentHistidineHistidine KinaseMolecular Dynamics SimulationMutationProtein Serine-Threonine KinasesRegulonStaphylococcus aureusTyrosineZincBacterial ProteinsCations, DivalentHistidineHistidine KinasePAS domain kinasesProtein Serine-Threonine KinasesTyrosineYycF protein, BacteriaZinc

Identifiers

PMID31296851
PMCPMC6624279
OpenAlexW2957015183

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.