Evidence map›Paper›PMID 31296658›Full record

ArticleThe Journal of biological chemistry2019

Metal-triggered conformational reorientation of a self-peptide bound to a disease-associated HLA-B*27 subtype.

Ronja Driller, Martin Ballaschk, Peter Schmieder, Barbara Uchanska-Ziegler, Andreas Ziegler, Bernhard Loll

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ronja DrillerInstitut für Chemie/Biochemie, AG Strukturbiochemie, Freie Universität Berlin, Takustrasse 6, 14195 Berlin, Germany.
Martin BallaschkLeibniz-Institut für Molekulare Pharmakologie, Robert-Rössle-Strasse 10, 13125 Berlin, Germany.
Peter SchmiederLeibniz-Institut für Molekulare Pharmakologie, Robert-Rössle-Strasse 10, 13125 Berlin, Germany.
Barbara Uchanska-ZieglerInstitut für Immungenetik, Charité-Universitätsmedizin Berlin, Freie Universität Berlin, Thielallee 73, 14195 Berlin, Germany; Ziegler Biosolutions, Fahrgasse 5, 79761 Waldshut-Tiengen, Germany.
Andreas ZieglerZiegler Biosolutions, Fahrgasse 5, 79761 Waldshut-Tiengen, Germany. Electronic address: ziegler-biosolutions@gmx.de.
Bernhard LollInstitut für Chemie/Biochemie, AG Strukturbiochemie, Freie Universität Berlin, Takustrasse 6, 14195 Berlin, Germany; MoloX GmbH, Takustrasse 6, 14195 Berlin, Germany. Electronic address: loll@chemie.fu-berlin.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Conformational changes of major histocompatibility complex (MHC) antigens have the potential to be recognized by T cells and may arise from polymorphic variation of the MHC molecule, the binding of modifying ligands, or both. Here, we investigated whether metal ions could affect allele-dependent structural variation of the two minimally distinct human leukocyte antigen (HLA)-B*27:05 and HLA-B*27:09 subtypes, which exhibit differential association with the rheumatic disease ankylosing spondylitis (AS). We employed NMR spectroscopy and X-ray crystallography coupled with ensemble refinement to study the AS-associated HLA-B*27:05 subtype and the AS-nonassociated HLA-B* 27:09 in complex with the self-peptide pVIPR (RRKWRRWHL). Both techniques revealed that pVIPR exhibits a higher degree of flexibility when complexed with HLA-B*27:05 than with HLA-B*27:09. Furthermore, we found that the binding of the metal ion Cu

Indexed as

Crystallography, X-RayHLA-B27 AntigenHumansMetals, HeavyModels, MolecularMolecular ConformationOrganometallic CompoundsPeptidesHLA-B27 AntigenMetals, HeavyOrganometallic CompoundsPeptidesankylosing spondylitisautoimmune diseaseautoimmunityconformational changecrystal structureensemble refinementHLA-B*27hypersensitivitymajor histocompatibility complex (MHC)NMR spectroscopynuclear magnetic resonance (NMR)peptide dynamicsX-ray crystallography

Identifiers

PMID31296658
PMCPMC6737219

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.