Evidence map›Paper›PMID 31295389›Full record

ReviewAngewandte Chemie (International ed. in English)2019

Direct Visualization of Live Zebrafish Glycans via Single-Step Metabolic Labeling with Fluorophore-Tagged Nucleotide Sugars.

Senlian Hong, Pankaj Sahai-Hernandez, Digantkumar Gopaldas Chapla, Kelley W Moremen, David Traver, Peng Wu

Abstract readReview
In one paragraph

Review in Angewandte Chemie (International ed. in English), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Senlian HongDepartment of Molecular Medicine, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA, 92037, USA.
Pankaj Sahai-HernandezDepartment of Cellular and Molecular Medicine, University of California at San Diego, La Jolla, CA, 92037, USA.
Digantkumar Gopaldas ChaplaComplex Carbohydrate Research Center, University of Georgia, Athens, GA, 30602, USA.
Kelley W MoremenComplex Carbohydrate Research Center, University of Georgia, Athens, GA, 30602, USA.
David TraverDepartment of Cellular and Molecular Medicine, University of California at San Diego, La Jolla, CA, 92037, USA.
Peng WuDepartment of Molecular Medicine, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA, 92037, USA.ORCID 0000-0002-5204-0229
Scripps Research Institute · USUniversity of California San Diego · USUniversity of Georgia · US

Funding

TR&D3. Approaches to Proteoglycan Function at Biochemical and Cellular LevelsP41GM103390 · NIGMS · UNIVERSITY OF GEORGIA · PI MOREMEN, KELLEY W. · 2012 to 2019
$14.5M
Recombinant Production of Glycosylation Enzymes for Biochem/Structural StudiesP01GM107012 · NIGMS · UNIVERSITY OF GEORGIA · PI MOREMEN, KELLEY · 2013 to 2017
$7.5M
Molecular and functional dissection of zebrafish hematopoietic stem cell nicheR01DK074482 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI TRAVER, DAVID · 2006 to 2024
$6.5M
Blood Cells in Hemostasis and ThrombosisT32HL086344 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GINSBERG, MARK HOWARD · 2008 to 2023
$4.4M
Origin of N-Glycan Site-Specific HeterogeneityR01GM130915 · NIGMS · UNIVERSITY OF GEORGIA · PI KANNAN, NATARAJAN, MOREMEN, KELLEY W. · 2019 to 2022
$3.4M
Chemical Tools for Studying Fucosylated GlycansR01GM093282 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI WU, PENG · 2010 to 2019
$3.4M
Chemoenzymatic methods for the detection of cellsurface glycansR01GM113046 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI WU, PENG · 2015 to 2018
$1.9M
Chemical tools for studying membrane protein glycosylationR01GM111938 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI OVRYN, BEN, WU, PENG · 2015 to 2018
$1.4M
NHLBI NIH HHS T32 HL086344NIDDK NIH HHS R01 DK074482NIGMS NIH HHS P01 GM107012NIGMS NIH HHS P41 GM103390NIGMS NIH HHS R01 GM093282NIGMS NIH HHS R01 GM111938NIGMS NIH HHS R01 GM113046NIGMS NIH HHS R01 GM130915
6 · The paper itself

Abstract

Dynamic turnover of cell-surface glycans is involved in a myriad of biological events, making this process an attractive target for in vivo molecular imaging. Metabolic glycan labeling coupled with bioorthogonal chemistry has paved the way for visualizing glycans in living organisms. However, a two-step labeling sequence is required, which suffers from the tissue-penetration difficulties of the imaging probes. Here, by exploring the substrate promiscuity of endogenous glycosyltransferases, we developed a single-step fluorescent glycan labeling strategy by using fluorophore-tagged analogues of the nucleotide sugars. Injecting fluorophore-tagged sialic acid and fucose into the yolk of zebrafish embryos at the one-cell stage enables systematic imaging of sialylation and fucosylation in live zebrafish embryos at distinct developmental stages. From these studies, we obtained insights into the role of sialylated and fucosylated glycans in zebrafish hematopoiesis.

Indexed as

AnimalsFluorescent DyesMolecular StructureNucleotidesPolysaccharidesSugarsZebrafishFluorescent DyesNucleotidesPolysaccharidesSugarsfluorescent probesfluorophore-tagged nucleotide sugarfucosylationglycan labelingsialic acids

Identifiers

PMID31295389
PMCPMC6820142
OpenAlexW2961833207

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.