Evidence map›Paper›PMID 31294212›Full record

ArticleAIMS microbiology2018

Analysis of gastrointestinal virus infection in immunocompromised hosts by multiplex virus PCR assay.

Miho Sasaki, Norio Shimizu, Yuriko Zushi, Toshiharu Saito, Hiroko Tsunemine, Kiminari Itoh, Yumi Aoyama, Yuta Goto, Taiichi Kodaka, Goh Tsuji and 4 more

Open access · goldAbstract read
In one paragraph

Article in AIMS microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Miho SasakiLaboratory of Cell Therapy, Shinko Hospital, Kobe, Japan.
Norio ShimizuDepartments of Virology, Medical Research Institute, Tokyo Medical and Dental University, Tokyo, Japan.
Yuriko ZushiLaboratory of Cell Therapy, Shinko Hospital, Kobe, Japan.
Toshiharu SaitoLaboratory of Cell Therapy, Shinko Hospital, Kobe, Japan.
Hiroko TsunemineLaboratory of Hematology, Shinko Hospital, Kobe, Japan.
Kiminari ItohLaboratory of Hematology, Shinko Hospital, Kobe, Japan.
Yumi AoyamaLaboratory of Hematology, Shinko Hospital, Kobe, Japan.
Yuta GotoLaboratory of Hematology, Shinko Hospital, Kobe, Japan.
Taiichi KodakaLaboratory of Hematology, Shinko Hospital, Kobe, Japan.
Goh TsujiLaboratory of Rheumatology, Shinko Hospital, Kobe, Japan.
Eri SendaLaboratory of Gastroenterology and Hepatology, Shinko Hospital, Kobe, Japan.
Takahiro FujimoriLaboratory of Pathology, Shinko Hospital, Kobe, Japan.
Tomoo ItohDepartment of Diagnostic Pathology, Kobe University Graduate School of Medicine, Kobe, Japan.
Takayuki TakahashiLaboratory of Hematology, Shinko Hospital, Kobe, Japan.
Shinko Hospital · JPTokyo Medical and Dental University · JPKobe University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Regarding viral infection of intestinal mucosa, there have been only a few studies on limited diseases, targeting a few herpes family viruses. In this study, we analyzed 12 kinds of DNA viruses including 8 species of herpes family viruses in the gastrointestinal mucosa of patients with hematologic malignancies, inflammatory bowel diseases, collagen diseases, or other miscellaneous forms of gastroenteritis using the multiplex virus PCR assay, which we recently developed. The virus PCR assay yielded positive results in 63 of 102 patients; Epstein-Barr virus (EBV) was the most frequently detected, followed by cytomegalovirus (CMV), human herpes virus 6 (HHV-6), HHV-7, parvovirus B19, and herpes simplex virus type 1. The frequencies of viral detection in the 4 diseases were similar involving these 6 viruses. Regarding CMV colitis, the multiplex virus PCR assay was superior to the immunohistopathologic method in detecting CMV. All viruses were more efficiently detected in the mucosa than in the blood in individual patients. These results suggest that CMV, EBV, and HHV-6 were commonly detected in the gastrointestinal mucosa of patients with these 4 diseases, and our multiplex virus PCR assay was useful for the early diagnosis of gastrointestinal virus infection, especially CMV colitis.

Indexed as

CMV colitisgastrointestinal mucosaherpes family virusmultiplex virus PCR assayviral gastroenteritis

Identifiers

PMID31294212
PMCPMC6604934
OpenAlexW2793914896

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.