Evidence map›Paper›PMID 31293114›Full record

ArticleRevista espanola de quimioterapia : publicacion oficial de la Sociedad Espanola de Quimioterapia2019

Comparison of two methods skipping cell lysis and protein extraction for identification of bacteria from blood cultures by matrix-assisted laser desorption/ionization time-of-flight mass-spectrometry.

I Torres, E Giménez, D Huntley, M Martínez, J Colomina, D Navarro

Abstract readComparative Study
In one paragraph

Article in Revista espanola de quimioterapia : publicacion oficial de la Sociedad Espanola de Quimioterapia, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

I Torres
E Giménez
D Huntley
M Martínez
J Colomina
D NavarroDavid Navarro, Microbiology Service, Hospital Clínico Universitario, and Department of Microbiology, School of Medicine. Av. Blasco Ibáñez 17, 46010 Valencia, Spain. david.navarro@uv.es.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveMatrix-assisted laser desorption/ionization time-of-flight mass-spectrometry (MALDI-TOF MS) is widely used for fast identification of bacteria from blood cultures (BC). We compared the performance of two procedures, one including a pre-enrichment step in brain heart infusion and the other a direct method using vacutainer separator gel tubes (DI), for identification of bacteria from blood cultures by MALDI-TOF MS.

methodsWe first prepared a training set of 20 simulated bacteremia specimens, including 10 Gram-negative and 10 Gram-positive species. A total of 145 non-consecutive BCs flagged as positive (68 Gram-negative rods, and 77 Gram-positive cocci) were prospectively analyzed (validation set).

resultsA total of 82% and 49% of isolates were correctly identified to the species level by the respective methods.

conclusionsThe pre-enrichment method outperformed the DI method for identification of virtually all bacterial species included in the panels.

Indexed as

BacteremiaBacterial Typing TechniquesBlood CultureGram-Negative BacteriaGram-Positive BacteriaGram-Positive CocciHumansProspective StudiesSpectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization

Identifiers

PMID31293114
PMCPMC6719652

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.