Evidence map›Paper›PMID 31292443›Full record

ArticleNature communications2019

Toxin-mediated ribosome stalling reprograms the Mycobacterium tuberculosis proteome.

Valdir C Barth, Ju-Mei Zeng, Irina O Vvedenskaya, Ming Ouyang, Robert N Husson, Nancy A Woychik

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Identification of Genes Encoded Toxin-Antitoxin System inInfectious disorders drug targets · 2024
    Article
  12. Are all VapC toxins ofJournal of biosciences · 2024
    Article
  13. Article
  14. Review
  15. [Effect ofSichuan da xue xue bao. Yi xue ban = Journal of Sichuan University. Medical science edition · 2022
    Article
  16. Article
  17. tRNAAntimicrobial agents and chemotherapy · 2022
    Article
  18. Review
  19. Article
  20. Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Valdir C BarthDepartment of Biochemistry and Molecular Biology, Rutgers University, Robert Wood Johnson Medical School, Piscataway, NJ, 08854, USA.ORCID http://orcid.org/0000-0002-7410-1598
Ju-Mei ZengDivision of Infectious Diseases, Boston Children's Hospital and Harvard Medical School, Boston, MA, 02115, USA.ORCID http://orcid.org/0000-0002-3633-8690
Irina O VvedenskayaWaksman Institute, Rutgers University, Piscataway, NJ, 08854, USA.ORCID http://orcid.org/0000-0002-1394-4188
Ming OuyangUniversity of Massachusetts-Boston, 100 William T Morrissey Blvd, Boston, MA, 02125, USA.ORCID http://orcid.org/0000-0002-8654-2884
Robert N HussonDivision of Infectious Diseases, Boston Children's Hospital and Harvard Medical School, Boston, MA, 02115, USA.ORCID http://orcid.org/0000-0001-8994-7046
Nancy A WoychikDepartment of Biochemistry and Molecular Biology, Rutgers University, Robert Wood Johnson Medical School, Piscataway, NJ, 08854, USA. nancy.woychik@rutgers.edu.ORCID http://orcid.org/0000-0002-3996-2990
Rutgers, The State University of New Jersey · USBoston Children's Hospital · USUniversity of Massachusetts Boston · US

Funding

A Mass Spectrometry System for Quantitative ProteomicsS10OD016400 · OD · RBHS-ROBERT WOOD JOHNSON MEDICAL SCHOOL · PI LOBEL, PETER · 2014 to 2014
$561k
M. tuberculosis MazF toxins: target identification and stress adaptationR56AI119055 · NIAID · RBHS-ROBERT WOOD JOHNSON MEDICAL SCHOOL · PI WOYCHIK, NANCY ANN · 2015 to 2015
$549k
Remodeling of ribosome function by MazF toxinsR21AI123859 · NIAID · RBHS-ROBERT WOOD JOHNSON MEDICAL SCHOOL · PI WOYCHIK, NANCY ANN · 2017 to 2018
$475k
NIAID NIH HHS R21 AI123859NIAID NIH HHS R56 AI119055NIH HHS S10 OD016400U.S. Department of Health & Human Services | National Institutes of Health (NIH) R21AI123859U.S. Department of Health & Human Services | National Institutes of Health (NIH) R56AI119055
6 · The paper itself

Abstract

Mycobacterium tuberculosis readily adapts to survive a wide range of assaults by modifying its physiology and establishing a latent tuberculosis (TB) infection. Here we report a sophisticated mode of regulation by a tRNA-cleaving toxin that enlists highly selective ribosome stalling to recalibrate the transcriptome and remodel the proteome. This toxin, MazF-mt9, exclusively inactivates one isoacceptor tRNA, tRNA

Indexed as

Bacterial ProteinsBacterial ToxinsEndoribonucleasesLatent TuberculosisMycobacterium tuberculosisProteomeRibosomesRNA, BacterialRNA, TransferToxin-Antitoxin SystemsTranscriptomeBacterial ProteinsBacterial ToxinsEndoribonucleasesMazF protein, Mycobacterium tuberculosisProteomeRNA, BacterialRNA, Transfer

Identifiers

PMID31292443
PMCPMC6620280
OpenAlexW2958553559

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.