Evidence map›Paper›PMID 31290917›Full record

ArticleThe plant genome2019

Genome-Wide Association Mapping of Grain Mold Resistance in the US Sorghum Association Panel.

Hugo E Cuevas, Ramon A Fermin-Pérez, Louis K Prom, Elizabeth A Cooper, Scott Bean, William L Rooney

Open access · goldAbstract read
In one paragraph

Article in The plant genome, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 26 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 2 countries.

Hugo E Cuevas
Ramon A Fermin-Pérez
Louis K Prom
Elizabeth A Cooper
Scott Bean
William L Rooney
University of Puerto Rico-Mayaguez · PRCenter for Grain and Animal Health Research · USSouthern Plains Agricultural Research Center · USTexas A&M University · USUniversity of North Carolina at Charlotte · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sorghum [ (L.) Moench] production in warm and humid regions is limited by grain mold disease, which can be caused by a complex of >40 pathogenic and opportunistic fungi. The identification of resistant plants within temperate-adapted germplasm is imperative for the development of better-adapted varieties. The performance of 331 accessions from the previously genotyped sorghum association panel (SAP) was evaluated in four tropical environments. Only 18 accessions showed low seed deterioration and high emergence rates. The resistant accessions showed high variation in seed tannin contents and panicle shape, indicating that grain mold resistance is not associated with a single phenotypic trait. Seed mycoflora analysis recovered pathogenic fungi , , and in both resistant and susceptible accessions. By genome-wide association scans using 268,289 single nucleotide polymorphisms (SNPs), we identified two loci associated with low seed deterioration and another associated with emergence rate. Candidate genes within these loci included one gene () and two genes ( and ) with domains associated with systemic acquired resistance, suggesting that resistance involved pathogen recognition and downstream signaling cascades. This study provides insight into the genetic control of grain mold resistance as well as valuable accessions for breeding programs in temperate environments.

Indexed as

Chromosome MappingChromosomes, PlantGenome-Wide Association StudyAscomycotaDisease ResistanceFusariumGenome, PlantPlant DiseasesSeedsSorghumTropical Climate

Identifiers

PMID31290917
PMCPMC12810102
OpenAlexW2936158364

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.