Evidence map›Paper›PMID 31289462›Full record

ArticleBiotechnology for biofuels2019

Transcriptomic analysis of the oleaginous yeast

Kyle R Pomraning, James R Collett, Joonhoon Kim, Ellen A Panisko, David E Culley, Ziyu Dai, Shuang Deng, Beth A Hofstad, Mark G Butcher, Jon K Magnuson

Open access · goldAbstract read
In one paragraph

Article in Biotechnology for biofuels, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Genome-scale model development and genomic sequencing of the oleaginous cladeFrontiers in bioengineering and biotechnology · 2024
    Article
  9. Near-complete genome sequence ofMicrobiology resource announcements · 2023
    Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. Article
  17. Inference of Regulatory System for TAG Biosynthesis inBioengineering (Basel, Switzerland) · 2020
    Article
  18. Lipid metabolism of the oleaginous yeast Lipomyces starkeyi.Applied microbiology and biotechnology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Kyle R Pomraning1Pacific Northwest National Laboratory, Richland, WA USA.ORCID 0000-0003-2324-2881
James R Collett1Pacific Northwest National Laboratory, Richland, WA USA.
Joonhoon Kim1Pacific Northwest National Laboratory, Richland, WA USA.
Ellen A Panisko1Pacific Northwest National Laboratory, Richland, WA USA.
David E Culley1Pacific Northwest National Laboratory, Richland, WA USA.
Ziyu Dai1Pacific Northwest National Laboratory, Richland, WA USA.
Shuang Deng1Pacific Northwest National Laboratory, Richland, WA USA.
Beth A Hofstad1Pacific Northwest National Laboratory, Richland, WA USA.
Mark G Butcher1Pacific Northwest National Laboratory, Richland, WA USA.
Jon K Magnuson1Pacific Northwest National Laboratory, Richland, WA USA.
Pacific Northwest National Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundEfficient and economically viable production of biofuels from lignocellulosic biomass is dependent on mechanical and chemical pretreatment and enzymatic hydrolysis of plant material. These processing steps yield simple sugars as well as plant-derived and process-added organic acids, sugar-derived dehydration products, aldehydes, phenolics and other compounds that inhibit the growth of many microorganisms.

resultsWe monitored sugar and ammonium utilization as well as biomass accumulation and found that growth of

conclusionsGrowth of

Indexed as

BiofuelBioreactorCorn stoverInhibitorsLipomyces starkeyiOleaginousPCSTranscriptomeYeast

Identifiers

PMID31289462
PMCPMC6593508
OpenAlexW2953988060

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.