Evidence map›Paper›PMID 31289346›Full record

ReviewThe ISME journal2019

Microbe-driven chemical ecology: past, present and future.

Ruth Schmidt, Dana Ulanova, Lukas Y Wick, Helge B Bode, Paolina Garbeva

Abstract readReview
In one paragraph

Review in The ISME journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Article
  6. Microbial Biotechnology in Agriculture.Progress in molecular and subcellular biology · 2026
    Review
  7. Review
  8. Pleiotropic role of PAX cyclolipopeptides in theApplied and environmental microbiology · 2025
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. The EpiphyteBiomolecules · 2024
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Ruth SchmidtINRS-Institut Armand-Frappier, Laval, H7V 1B7, Canada.
Dana UlanovaFaculty of Agriculture and Marine Science, Kochi University, Kochi, 783-8502, Japan.
Lukas Y WickDepartment of Environmental Microbiology, Helmholtz Centre for Environmental Research - UFZ, D-04318, Leipzig, Germany.
Helge B BodeMolecular Biotechnology, Department of Biosciences and Buchmann Institute for Molecular Life Sciences (BMLS), Goethe Universität Frankfurt, Frankfurt am Main, 60438, Germany.ORCID http://orcid.org/0000-0001-6048-5909
Paolina GarbevaNetherlands Institute of Ecology, Wageningen, 6708 PB, The Netherlands. p.garbeva@nioo.knaw.nl.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In recent years, research in the field of Microbial Ecology has revealed the tremendous diversity and complexity of microbial communities across different ecosystems. Microbes play a major role in ecosystem functioning and contribute to the health and fitness of higher organisms. Scientists are now facing many technological and methodological challenges in analyzing these complex natural microbial communities. The advances in analytical and omics techniques have shown that microbial communities are largely shaped by chemical interaction networks mediated by specialized (water-soluble and volatile) metabolites. However, studies concerning microbial chemical interactions need to consider biotic and abiotic factors on multidimensional levels, which require the development of new tools and approaches mimicking natural microbial habitats. In this review, we describe environmental factors affecting the production and transport of specialized metabolites. We evaluate their ecological functions and discuss approaches to address future challenges in microbial chemical ecology (MCE). We aim to emphasize that future developments in the field of MCE will need to include holistic studies involving organisms at all levels and to consider mechanisms underlying the interactions between viruses, micro-, and macro-organisms in their natural environments.

Indexed as

EcosystemMicrobial InteractionsBacteriaEcologyMicrobiota

Identifiers

PMID31289346
PMCPMC6794290

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.