Evidence map›Paper›PMID 31289129›Full record

ArticleRNA (New York, N.Y.)2019

Spt5 modulates cotranscriptional spliceosome assembly in

Isabella E Maudlin, Jean D Beggs

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Isabella E MaudlinWellcome Centre for Cell Biology, School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3BF, United Kingdom.ORCID 0000-0002-6312-9552
Jean D BeggsWellcome Centre for Cell Biology, School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3BF, United Kingdom.ORCID 0000-0002-8179-6519
Wellcome Centre for Cell Biology · GB

Funding

Wellcome TrustWellcome Trust 092076Wellcome Trust 104648Wellcome Trust 105256
6 · The paper itself

Abstract

There is increasing evidence from yeast to humans that pre-mRNA splicing occurs mainly cotranscriptionally, such that splicing and transcription are functionally coupled. Currently, there is little insight into the contribution of the core transcription elongation machinery to cotranscriptional spliceosome assembly and pre-mRNA splicing. Spt5 is a member of the core transcription elongation machinery and an essential protein, whose absence in budding yeast causes defects in pre-mRNA splicing. To determine how Spt5 affects pre-mRNA splicing, we used the auxin-inducible degron system to conditionally deplete Spt5 in

Indexed as

SpliceosomesTranscription, GeneticChromosomal Proteins, Non-HistoneImmunoprecipitationProtein BindingRibonucleoprotein, U5 Small NuclearRNA SplicingSaccharomyces cerevisiaeTranscriptional Elongation FactorsChromosomal Proteins, Non-HistoneRibonucleoprotein, U5 Small NuclearSPT5 transcriptional elongation factorTranscriptional Elongation Factorspre-mRNA splicingtranscriptionyeast

Identifiers

PMID31289129
PMCPMC6800482
OpenAlexW2961268019

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.