Evidence map›Paper›PMID 31288444›Full record

ArticleMolecules (Basel, Switzerland)2019

Experimental Insight into the Structural and Functional Roles of the 'Black' and 'Gray' Clusters in Recoverin, a Calcium Binding Protein with Four EF-Hand Motifs.

Sergey E Permyakov, Alisa S Vologzhannikova, Ekaterina L Nemashkalova, Alexei S Kazakov, Alexander I Denesyuk, Konstantin Denessiouk, Viktoriia E Baksheeva, Andrey A Zamyatnin, Evgeni Yu Zernii, Vladimir N Uversky and 1 more

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 53% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Sergey E PermyakovInstitute for Biological Instrumentation of the Russian Academy of Sciences, Federal Research Center Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences, 142290 Pushchino, Russia.
Alisa S VologzhannikovaInstitute for Biological Instrumentation of the Russian Academy of Sciences, Federal Research Center Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences, 142290 Pushchino, Russia.ORCID 0000-0001-5550-2129
Ekaterina L NemashkalovaInstitute for Biological Instrumentation of the Russian Academy of Sciences, Federal Research Center Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences, 142290 Pushchino, Russia.
Alexei S KazakovInstitute for Biological Instrumentation of the Russian Academy of Sciences, Federal Research Center Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences, 142290 Pushchino, Russia.
Alexander I DenesyukInstitute for Biological Instrumentation of the Russian Academy of Sciences, Federal Research Center Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences, 142290 Pushchino, Russia.
Konstantin DenessioukStructural Bioinformatics Laboratory, Biochemistry, Faculty of Science and Engineering, Åbo Akademi University, 20520 Turku, Finland.
Viktoriia E BaksheevaBelozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, 119992 Moscow, Russia.
Andrey A ZamyatninBelozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, 119992 Moscow, Russia.ORCID 0000-0002-3046-4565
Evgeni Yu ZerniiBelozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, 119992 Moscow, Russia.
Vladimir N UverskyInstitute for Biological Instrumentation of the Russian Academy of Sciences, Federal Research Center Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences, 142290 Pushchino, Russia. vuversky@health.usf.edu.ORCID 0000-0002-4037-5857
Eugene A PermyakovInstitute for Biological Instrumentation of the Russian Academy of Sciences, Federal Research Center Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences, 142290 Pushchino, Russia. epermyak@yandex.ru.
Institute for Biological Instrumentation · RUÅbo Akademi University · FISechenov University · RULomonosov Moscow State University · RUUniversity of South Florida · US

Funding

Joe, Pentti, and Tor Borg Memorial Fund A.I.D. and K.D. for structural modelingRussian Science Foundation 16-14-10373Sigrid Juselius Foundation A.I.D. and K.D. for structural modeling
6 · The paper itself

Abstract

Recently, we have found that calcium binding proteins of the EF-hand superfamily (i.e., a large family of proteins containing helix-loop-helix calcium binding motif or EF-hand) contain two types of conserved clusters called cluster I ('black' cluster) and cluster II ('grey' cluster), which provide a supporting scaffold for the Ca

Indexed as

AlanineAmino Acid MotifsAmino Acid SubstitutionCalciumG-Protein-Coupled Receptor Kinase 1HumansHydrophobic and Hydrophilic InteractionsKineticsModels, MolecularMutationPhosphorylationProtein BindingRecoverinRhodopsinAlanineCalciumG-Protein-Coupled Receptor Kinase 1GRK1 protein, humanRecoverinRhodopsincalcium binding proteinsEF-handprotein functionprotein structurerecoverin

Identifiers

PMID31288444
PMCPMC6650976
OpenAlexW2958847255

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.