Evidence map›Paper›PMID 31286443›Full record

ArticleJournal of the American Society for Mass Spectrometry2019

Gas-Phase Collisions with Trimethylamine-N-Oxide Enable Activation-Controlled Protein Ion Charge Reduction.

Margit Kaldmäe, Nicklas Österlund, Danai Lianoudaki, Cagla Sahin, Peter Bergman, Tomas Nyman, Nina Kronqvist, Leopold L Ilag, Timothy M Allison, Erik G Marklund and 1 more

Abstract read
In one paragraph

Article in Journal of the American Society for Mass Spectrometry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
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  7. Review
  8. Emergence of mass spectrometry detergents for membrane proteomics.Analytical and bioanalytical chemistry · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Margit KaldmäeScience for Life Laboratory, Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, 171 65, Stockholm, Sweden.
Nicklas ÖsterlundDepartment of Biochemistry and Biophysics, Stockholm University, 106 91, Stockholm, Sweden.
Danai LianoudakiScience for Life Laboratory, Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, 171 65, Stockholm, Sweden.
Cagla SahinScience for Life Laboratory, Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, 171 65, Stockholm, Sweden.
Peter BergmanDivision of Clinical Microbiology, Department of Laboratory Medicine, Karolinska Institutet, 141 86, Huddinge, Sweden.
Tomas NymanProtein Science Facility, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, 171 65, Stockholm, Sweden.
Nina KronqvistDivision for Neurogeriatrics, Department of Neurobiology, Care Sciences and Society (NVS), Karolinska Institutet, 141 83, Huddinge, Sweden.
Leopold L IlagDepartment of Environmental Science and Analytical Chemistry, Stockholm University, 106 91, Stockholm, Sweden.
Timothy M AllisonBiomolecular Interaction Centre and School of Physical and Chemical Sciences, University of Canterbury, Christchurch, 8140, New Zealand.
Erik G MarklundDepartment of Chemistry - BMC, Uppsala University, Box 576, 751 23, Uppsala, Sweden.
Michael LandrehScience for Life Laboratory, Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, 171 65, Stockholm, Sweden. michael.landreh@ki.se.

Funding

Karolinska Institutet Faculty-funded career positionKarolinska Institutet StartNeuro StartupStiftelsen för Strategisk Forskning ICA7Vetenskapsrådet 2015-00559
6 · The paper itself

Abstract

Modulating protein ion charge is a useful tool for the study of protein folding and interactions by electrospray ionization mass spectrometry. Here, we investigate activation-dependent charge reduction of protein ions with the chemical chaperone trimethylamine-N-oxide (TMAO). Based on experiments carried out on proteins ranging from 4.5 to 35 kDa, we find that when combined with collisional activation, TMAO removes approximately 60% of the charges acquired under native conditions. Ion mobility measurements furthermore show that TMAO-mediated charge reduction produces the same end charge state and arrival time distributions for native-like and denatured protein ions. Our results suggest that gas-phase collisions between the protein ions and TMAO result in proton transfer, in line with previous findings for dimethyl- and trimethylamine. By adjusting the energy of the collisions experienced by the ions, it is possible to control the degree of charge reduction, making TMAO a highly dynamic charge reducer that opens new avenues for manipulating protein charge states in ESI-MS and for investigating the relationship between protein charge and conformation. ᅟ.

Indexed as

GasesHumansIonsMethylaminesModels, MolecularProtein ConformationProtein DenaturationProtein FoldingProteinsSpectrometry, Mass, Electrospray IonizationGasesIonsMethylaminesProteinstrimethyloxamineCharge reductionGas-phase basicityNative mass spectrometryProtein structure

Identifiers

PMID31286443
PMCPMC6669196

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.